Structural highlights
5fsd is a 3 chain structure with sequence from Sporosarcina pasteurii. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
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| Ligands: | , , , , |
| NonStd Res: | , |
| Related: | 5fse |
| Activity: | Urease, with EC number 3.5.1.5 |
| Resources: | FirstGlance, OCA, PDBe, RCSB, PDBsum |
Publication Abstract from PubMed
The high activity of urease, a Ni(ii) enzyme, has several adverse effects on human health and agriculture, and its modulation needs the use of inhibitors. 1,4-Benzoquinone (BQ) irreversibly inactivates Sporosarcina pasteurii urease (SPU), with first order kinetics for both the inhibitor and the enzyme. This reaction is stoichiometrically quenched in the presence of sulphite. The 2.07 A crystal structure of SPU bound to BQ shows the presence of a 1,4-hydroquinone moiety covalently bound to the thiol group of alphaCys322, a key residue found on the mobile flap regulating the substrate access to the active site. The 1.75 A crystal structure obtained when sulphite is added to a solution of SPU previously incubated with BQ shows the presence of a 2,5-dihydroxy-benzenesulphonate moiety bound to the alphaCys322 thiol group. These data reveal how the active site cysteine reacts with a prototypical BQ moiety, found in a large number of natural substances potentially suitable to control the urease activity.
Inactivation of urease by 1,4-benzoquinone: chemistry at the protein surface.,Mazzei L, Cianci M, Musiani F, Ciurli S Dalton Trans. 2016 Apr 7;45(13):5455-9. doi: 10.1039/c6dt00652c. Epub 2016 Mar, 10. PMID:26961812[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Mazzei L, Cianci M, Musiani F, Ciurli S. Inactivation of urease by 1,4-benzoquinone: chemistry at the protein surface. Dalton Trans. 2016 Apr 7;45(13):5455-9. doi: 10.1039/c6dt00652c. Epub 2016 Mar, 10. PMID:26961812 doi:http://dx.doi.org/10.1039/c6dt00652c
