Chitinase 3D structures

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3D Structures of Chitinase

Updated on 07-May-2019 {{#tree:id=OrganizedByTopic|openlevels=0|

• Chitinase I or chitotriosidase I

• • 5hbf – hChi - human
    
  • 4wjx, 4wka – hChi catalytic domain
    
  • 3aro, 3b8s – VhChi residues 22-597 – Vibrio harveyi
    
  • 3b9e - VhChi residues 22-597 (mutant)
    
  • 1k85 – BcChi fibronectin domain – Bacillus circulans – NMR
    
  • 1itx - BcChi catalytic domain
    
  • 1ed7 – BcChi chitin-binding domain - NMR
    
  • 1ll6, 1ll7 - CiChi residues 36-427 (mutant) – Coccicioides immitis
    
  • 1d2k - CiChi residues 36-427
    
  • 3n11 – BcChi – Bacillus cereus
    
  • 3iwr, 2dkv – Chi residues 33-340 – Japanese rice
    
  • 3g6l - BoChi residues 21-426 – Bionectria ochroleuca
    
  • 3oa5, 4dws, 4a5q – Chi – Yersinia entomophaga
    
  • 4mpi – HbChi chitin-binding domain – Hevea brasiliensis
    
  • 4mst – HbChi catalytic domain
    
  • 4tx7 – Chi – yard-long bean
    

• Chitinase I binary complex

• • 3arp, 3arq, 3arr, 3ars, 3art, 3aru, 3arv, 3arw, 3arx, 3ary, 3arz – VhChi residues 22-597 + inhibitor
    
  • 3as0, 3as1, 3as2, 3as3 – VhChi residues 22-597 (mutant) + inhibitor
    
  • 3b9a, 3b9d - VhChi residues 22-597 + polysaccharide
    
  • 2xvn, 2xuc – AfChi residues 29-307 + inhibitor – Aspergillus fumigatus
    
  • 3n13, 3n15, 3n17, 3n18 – BcChi (mutant) + NAG
    
  • 3n12 – BcChi + Zn
    
  • 3n1a - BcChi (mutant) + inhibitor
    
  • 3g6m - BoChi residues 21-426 + caffeine
    
  • 1waw, 1wb0, 4wk9, 4wkf, 4wkh – hChi catalytic domain + polypeptide – human
    
  • 1hkk, 1hkm, 3rm4, 3rm8, 3rm9, 3rme, 5nrf, 5nra, [[5nr8] – hChi catalytic domain + inhibitor
    
  • 1ll4 - CiChi residues 36-427 + inhibitor
    
  • 3wl1, 3wqv, 3wqw – cbChi + GlcNAC
    
  • 3wl0 – cbChi (mutant) + GlcNAC
    

• Chitinase II

• • 1e15, 3wd0 - SmChi
    
  • 1ogb, 1goi, 1e6p - SmChi (mutant)
    
  • 1kfw – Chi catalytic domain – Arthrobacter
    
  • 1dxj – Chi – Jack bean
    
  • 5y29 – OfChi catalytic domain 1 residues 1606-1992 – Ostrinia furnacalis
    
  • 5y2a – OfChi catalytic domain 2 residues 2056-2438
    

• Chitinase II binary complex

• • 1ogg, 1ur9 - SmChi (mutant) + inhibitor
    
  • 1e6n - SmChi (mutant) + polysaccharide
    
  • 1ur8, 1gpf, 1e6r, 3wd1, 3wd2, 3wd3, 3wd4 - SmChi + inhibitor
    
  • 1e6z – SmChi + intermediate
    
  • 2a3a, 2a3b, 2a3c, 2a3e – AfChi + inhibitor
    
  • 1w1p, 1w1t, 1w1v, 1w1y, 1o6i, 1h0g, 1h0i – SmChi + polypeptide
    
  • 5y2b – OfChi catalytic domain 1 + acetylchitooctaose
    
  • 5y2c – OfChi catalytic domain 2 (mutant) + acetylchitooctaose
    

• Chitinase III

• • 2dbt, 1wvu – SgChi residues 30-294 – Streptomyces griseus
    
  • 1wvv - SgChi residues 30-294 (mutant)
    
  • 2d49 – SgChi chitin-binding domain - NMR
    
  • 2xvp – AfChi
    
  • 2xtk, 4tx6 – AfChi + inhibitor
    
  • 4toq – Chi - pomegrenate
    
  • 5wup – OfChi residues 1-482
    
  • 5wv8 – OfChi residues 1-482 (mutant)
    
  • 5wv9 – OfChi residues 1-482 + GlcNAc
    
  • 5wvb – OfChi residues 1-482 (mutant) + GlcNAc
    
  • 5wus – OfChi residues 528-987
    
  • 5wvf – OfChi residues 528-987 (mutant)
    
  • 5wvh – OfChi residues 528-987 + GlcNAc
    
  • 5wvg – OfChi residues 528-987 (mutant) + GlcNAc
    

• Chitinase IV

• • 3hbd, 3hbe, 3hbh - Chi catalytic domain – Norway spruce
    
  • 4mck – Chi - maize
    
  • 5h7t – Chi chitinase domain – Japanese cedar
    

• Chitinase V

• • 3alf – tChi residues 26-377 – tobacco
    

• Chitinase V binary complex

• • 3alg - tChi residues 26-377 (mutant) + NAG
    
  • 3chc, 3chd, 3che, 3chf - AfChi + polypeptide
    
  • 3ch9, 2iuz – AfChi + inhibitor
    

• Chitinase VIII

• • 2cjl - Chi residues 41-244 – Streptomyces coelicolor
    

• Chitinase XVIII

• • 3sim – Chi – Crocus vernus

• Chitinase A

• • 3wh1, 3wij – BcChiA + GlcNAC – Bryum coronatum
    
  • 4ij4 – BcChiA (mutant) + GlcNAC
    
  • 4mnj, 4r5e – spChiA – sago palm
    
  • 4mnk – spChiA + GlcNAC
    
  • 4mnl, 4mnm – spChiA (mutant) + GlcNAC
    
  • 5dez – ApChiA + NAG – Autographa polyhedrosis
    
  • 5df0 – ApChiA + NAG + chitotriothiazoline
    
  • 5bum – ChiA LYSM domain – field horsetail
    
  • 1edq, 1ctn, 5zl9, 5z7o, 5z7n, 5z7m - SmChiA – Serratia marcescens
    
  • 1x6l, 1rd6 – SmChiA (mutant)
    
  • 1x6n - SmChi (mutant) + inhibitor
    
  • 1ffq, 2wk2, 2wly, 2wlz, 2wm0 - SmChi + inhibitor
    
  • 1nh6, 1k9t, 1ffr, 1eib, 1ehn - SmChi (mutant) + polysaccharide
    
  • 4pxv, 5ylg – PrChiA LYSM domain – Pteris ryukuensis
    
  • 4rl3 – PrChiA catalytic domain
    

• Chitinase B

• • 4z2g, 4z2h, 4z2i, 4z2j, 4z2k, 4z2l – SmChiB + inhibitor
    

• Chitinase C

• • 4dyg – RyChiC + NAG – Rye
    
  • 4dwx - RyChiC
    
  • 4j0l – RyChiC + GlcNAC
    
  • 4axn – SmChiC
    

• Chitinase H

• • 3w4r, 5gpr – cbChiH – corn borer
    
  • 3wkz – cbChiH (mutant)
    
  • 5gqb – cbChiH + chitohepatose
    

• Other chitinases

• • 1wno, 1w9p - AfChi
    
  • 2dsk - PfChi catalytic domain – Pyrococcus furiosus
    
  • 3afb - PfChi catalytic domain (mutant)
    
  • 1cns – Chi – Hordeum vulgare
    
  • 2czn, 2rts - PfChi chitin-binding domain – NMR
    
  • 2cwr - PfChi chitin-binding domain
    
  • 3ian – Chi (mutant) – Lactococcus lactis
    
  • 3fxy - hChi catalytic domain
    
  • 1lq0 - hChi residues 22-286
    
  • 1guv - hChi residues 22-387
    
  • 3fnd, 3co4 – Chi – Bacteroides thetaiotamicron
    
  • 3cql – Chi – Carica papaya
    
  • 2z37 - BjChi catalytic domain – Brassica juncea
    
  • 2z39 – BjChi catalytic domain (mutant)
    
  • 2uy2 – yChi residues 22-315 – yeast
    
  • 4hmc – MmChi 60 – Moritella marina
    
  • 4mb3 – MmChi 60 (mutant)
    
  • 3w3e – Chi – cowpea
    
  • 3w6b – RaChi catalytic domain – Ralstonia
    
  • 3w6e – RaChi catalytic domain (mutant)
    
  • 4w5z – Chi 60 catalytic domain – Vibrio marinus
    
  • 5kz6 – Chi – Bacillus anthracis
    
  • 5gzt, 5gzv, 5gzu – ChiW – Paeniacillus
    
  • 5dhd – TkChi CHBD2 domain – Thermococcus kodakarensis
    
  • 5dhe – TkChi CHBD3 domain
    
  • 5aa7 – Chi polusaccharide monooxygenase domain – Jonesia dentrificans
    
  • 4w5u – Chi 40 – Streptomyces thermoviolaceus
    
  • 4txg – Chi – Chromobacterium violaceum
    
  • 5vg0 – JdChi – Jonesia denitrificans
    
  • 5vg1 – JdChi – Neutron
    
  • 5k2l – Chi LYSM domain – Volvox carteri
    
  • 6idn – Chi – Ipomoea carnea
    
  • 6g9c, 6g9e – Chi – pig whipworm
    
  • 6bt9 – Chi – Bacillus thuringesis
    
  • 5yuq, 5xwq, 5xwf – Chi – Rhizomucor miehei
    

• Other chitinases binary complex

• • 3a4w, 3a4x – PfChi catalytic domain (mutant) + NAG
    
  • 1lg1 - hChi residues 22-387 + chitobiose
    
  • 1lg2 - hChi residues 22-387 + ethylene glycol
    
  • 3fy1, 2ybt, 2ybu - hChi catalytic domain + inhibitor
    
  • 1hki, 1hkj - hChi + inhibitor
    
  • 2z38 - BjChi catalytic domain + Cl
    
  • 2uy3, 2uy4, 2uy5 - yChi residues 22-315 + inhibitor
    
  • 1w9v, 1w9u - AfChi + polypeptide
    
  • 4hmd – MmChi 60 + intermediate
    
  • 4hme – MmChi 60 + NAG
    
  • 4mb4, 4mb5 – MmChi 60 (mutant) + NAG
    
  • 3w6c – RaChi catalytic domain + disaccharide
    
  • 3w6d, 3w6f – RaChi catalytic domain (mutant) + polysaccharide
    
  • 5xsv - TcChi residues 321-805 – Thermococcus chitonophagus
    
  • 5xsx, 5xsw - TcChi residues 321-805 + substrate
    

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spinqualitylabelsall models Caption for this structure Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image This is a default text for your page Chitinase 3D structures. Click above on edit this page to modify. Be careful with the < and > signs. You may include any references to papers as in: the use of JSmol in Proteopedia [1] or to the article describing Jmol [2] to the rescue. Contents 1 Function 2 Disease 3 Relevance 4 Structural highlights Function Disease Relevance Structural highlights This is a sample scene created with SAT to by Group, and another to make of the protein. You can make your own scenes on SAT starting from scratch or loading and editing one of these sample scenes.

References

1. ↑ Hanson, R. M., Prilusky, J., Renjian, Z., Nakane, T. and Sussman, J. L. (2013), JSmol and the Next-Generation Web-Based Representation of 3D Molecular Structure as Applied to Proteopedia. Isr. J. Chem., 53:207-216. doi:http://dx.doi.org/10.1002/ijch.201300024
2. ↑ Herraez A. Biomolecules in the computer: Jmol to the rescue. Biochem Mol Biol Educ. 2006 Jul;34(4):255-61. doi: 10.1002/bmb.2006.494034042644. PMID:21638687 doi:10.1002/bmb.2006.494034042644