TRAP dicarboxylate transporter, DctP subunit

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Bovine papillomavirus 1 replication protein E1 complex with DNA (PDB code 1ksx)

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3D structures of TRAP dicarboxylate transporter, DctP subunit

Updated on 31-January-2021

Domains: helicase 301-605; DNA-binding (DBD) 286-365

4pfi - DctP - Marinobacter hydrocarbonoclasticus
4n6d - DsDctP - Desulfovibrio salexigens
4n6k - DsDctP + diglycerolphosphate
4nn3 - DsDctP + orotate
4nhb - DctP + glycerolphosphate - Desulfovibrio desulfuricans
4ngu - DctP + Ala-Ala - Desulfovibrio alaskensis
4xeq - DctP + pantoate - Desulfovibrio vulgaris
4mco, 4mev - DctP + malonate - Rhodoferax ferrireducens
4ovt - DctP + fuconate - Ochtrobactrum anthropi
5cm6 - DctP + pyruvate - Pseudoalteromonas atlantica
4n91 - DctP + glucuronate - Anaerococcus prevotii
4ovq - DctP + glucuronate - Roeobacter denitrificans
4ovr - DctP + galacturonate - Xanthobacter autotrophicus
4mig - PoDctP + galacturonate - Polaromonas
4n8g - DctP + Ala-Ala - Chromohalobacter salexigens
4ovs - DctP + succinate - Sulfurospirillum deleyianum
4o94 - DctP + succinate - Rhodopseudomonas palustris
4pfr - RsDctP + malate - Rhodobacter sphaeroides
4x8r - RsDctP + glucuronate
4xfe - DctP + glucuronate - Pseudomonas putida
4o7m - DctP + malate - Shewanella loihica

References

  1. Wilson VG, West M, Woytek K, Rangasamy D. Papillomavirus E1 proteins: form, function, and features. Virus Genes. 2002 Jun;24(3):275-90. doi: 10.1023/a:1015336817836. PMID:12086149 doi:http://dx.doi.org/10.1023/a:1015336817836
  2. Baedyananda F, Chaiwongkot A, Bhattarakosol P. Elevated HPV16 E1 Expression Is Associated with Cervical Cancer Progression. Intervirology. 2017;60(5):171-180. doi: 10.1159/000487048. Epub 2018 Mar 1. PMID:29495005 doi:http://dx.doi.org/10.1159/000487048
  3. Enemark EJ, Stenlund A, Joshua-Tor L. Crystal structures of two intermediates in the assembly of the papillomavirus replication initiation complex. EMBO J. 2002 Mar 15;21(6):1487-96. PMID:11889054 doi:http://dx.doi.org/10.1093/emboj/21.6.1487

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