AlphaFold/Index

From Proteopedia

Here are pages in Proteopedia that relate to AlphaFold.

• AlphaFold. An introduction and overview.

Making Predictions

• How to predict structures with AlphaFold when the AlphaFold Database does not already have what you want.
• Joining AlphaFold predictions for halves of a molecule, when the sequence is too long for AlphaFold to handle.

Interpreting Predictions

• AlphaFold pLDDT and expected distance error

Examples of Predictions

• AlphaFold2 examples from CASP 14. A detailed analysis of several AlphaFold predictions compared with empirically-determined structures.