Structural highlights
5z1x is a 2 chain structure with sequence from Cerrena. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
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Ligands: | , , , , |
Activity: | Laccase, with EC number 1.10.3.2 |
Resources: | FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT |
Publication Abstract from PubMed
A high-efficiency laccase, DLac, was isolated from Cerrena sp. RSD1. The kinetic studies indicate that DLac is a diffusion-limited enzyme. The crystal structure of DLac was determined to atomic resolution, and its overall structure shares high homology to monomeric laccases, but displays unique substrate-binding loops from those in other laccases. The substrate-binding residues with small side chain and the short substrate-binding loop IV broaden the substrate-binding cavity and may facilitate large substrate diffusion. Unlike highly glycosylated fungal laccases, the less-glycosylated DLac contains one highly conserved glycosylation site at N432 and an unique glycosylation site at N468. The N-glycans stabilize the substrate-binding loops and the protein structure, and the first N-acetylglucosamine is crucial for the catalytic efficiency. Additionally, a fivefold increase in protein yield is achieved via the submerged culture method for industrial applications. Database: The atomic coordinates of the structure of DLac from Cerrena sp. RSD1 and structural factors have been deposited in the RCSB Protein Data Bank (PDB ID: 5Z1X).
Kinetic analysis and structural studies of a high-efficiency laccase from Cerrena sp. RSD1.,Wu MH, Lee CC, Hsiao AS, Yu SM, Wang AH, Ho TD FEBS Open Bio. 2018 Jul 3;8(8):1230-1246. doi: 10.1002/2211-5463.12459., eCollection 2018 Aug. PMID:30087829[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Wu MH, Lee CC, Hsiao AS, Yu SM, Wang AH, Ho TD. Kinetic analysis and structural studies of a high-efficiency laccase from Cerrena sp. RSD1. FEBS Open Bio. 2018 Jul 3;8(8):1230-1246. doi: 10.1002/2211-5463.12459., eCollection 2018 Aug. PMID:30087829 doi:http://dx.doi.org/10.1002/2211-5463.12459