1p9k

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spinqualitylabelsall models PDB ID 1p9k Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image
Gene:	ybcJ (Escherichia coli)
Resources:	FirstGlance, OCA, PDBsum, RCSB
Coordinates:	save as pdb, mmCIF, xml

THE SOLUTION STRUCTURE OF YBCJ FROM E. COLI REVEALS A RECENTLY DISCOVERED ALFAL MOTIF INVOLVED IN RNA-BINDING

Overview

The structure of the recombinant Escherichia coli protein YbcJ, a representative of a conserved family of bacterial proteins (COG2501), was determined by nuclear magnetic resonance. The fold of YbcJ identified it as a member of the larger family of S4-like RNA binding domains. These domains bind to structured RNA, such as that found in tRNA, rRNA, and a pseudoknot of mRNA. The structure of YbcJ revealed a highly conserved patch of basic residues, comprising amino acids K26, K38, R55, K56, and K59, which likely participate in RNA binding.

About this Structure

1P9K is a Single protein structure of sequence from Escherichia coli. This structure supersedes the now removed PDB entry 1O09. Full crystallographic information is available from OCA.

Reference

The solution structure of YbcJ from Escherichia coli reveals a recently discovered alphaL motif involved in RNA binding., Volpon L, Lievre C, Osborne MJ, Gandhi S, Iannuzzi P, Larocque R, Cygler M, Gehring K, Ekiel I, J Bacteriol. 2003 Jul;185(14):4204-10. PMID:12837795

Page seeded by OCA on Sun Mar 30 22:56:47 2008