2ped

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PDB ID 2ped

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, resolution 2.95Å
Ligands: , , , , , , , , ,
Related: 1U19, 2G87


Resources: FirstGlance, OCA, PDBsum, RCSB
Coordinates: save as pdb, mmCIF, xml



Crystallographic model of 9-cis-rhodopsin


Overview

The primary photochemical process of the visual function has been investigated using the three crystallographic models, 11-cis-rhodopsin, all-trans-bathorhodopsin, and the artificial isomeric 9-cis-rhodopsin. Detailed examination of the atomic displacements and dihedral angle changes of the retinal chromophore involved in the interconversion among these isomers suggests the mechanism of isomerization efficiency.

About this Structure

2PED is a Single protein structure of sequence from Bos taurus. Full crystallographic information is available from OCA.

Reference

Photoisomerization mechanism of rhodopsin and 9-cis-rhodopsin revealed by x-ray crystallography., Nakamichi H, Buss V, Okada T, Biophys J. 2007 Jun 15;92(12):L106-8. Epub 2007 Apr 20. PMID:17449675

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