User:Tilman Schirmer/Sandbox 201

From Proteopedia

Jump to: navigation, search

back

PleD

Contents

Intro

from Caulobacter crescentus is a response regulator with an unorthodox catalytic, diguanylate cyclase, output domain. It is composed of a canonical CheY-like response regulator receiver () domain, 

a Rec-like (scene name='User:Tilman_Schirmer/Sandbox_201/Protomer_rec_prime/2'>Rec'</scene>) adaptor domain, and a C-terminal domain that confers the catalytic acitvity.


Diguanylate cyclase PleD (1w25)

Drag the structure with the mouse to rotate





Substrate binding site

2v0n

Drag the structure with the mouse to rotate


















Allosteric product binding site

Allosteric product binding site

Drag the structure with the mouse to rotate


C-di-GMP


Primary inhibition site (Ip)


Secondary inhibition site (Is)


Primary and secondary inhibition sites





Two conformations

non-activated (1w25)
non-activated (1w25)
activated (BeF3- modified; 2v0n)
activated (BeF3- modified; 2v0n)


non-activated (1w25)

Drag the structure with the mouse to rotate

activated (BeF3- modified; 2v0n)

Drag the structure with the mouse to rotate


Non-activated conformation

1w25

1w25

Drag the structure with the mouse to rotate

: , ,



















Activated conformation

2v0n

2v0n

Drag the structure with the mouse to rotate



















Proteopedia Page Contributors and Editors (what is this?)

Tilman Schirmer

Personal tools