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- 22:16, 4 January 2022 Karsten Theis (Talk | contribs) uploaded "Image:Pseudorotation cyclopentane.PNG" (Conformations of cyclopentane ordered by pseudorotation angle. The pentagons represent the five-membered ring, with atoms above the plane shown as blue circles, those below the plane shown as orange circles, and the three or four others in the plane. Conf)
- 21:17, 4 January 2022 Karsten Theis (Talk | contribs) uploaded "Image:Twist.png" (PNGJ file of cyclopentane in a twisted conformation, modeled in Jmol starting from the envelope conformation using the "rotate branch" command to adjust torsion angles after temporarily opening the ring.)
- 16:16, 4 January 2022 Karsten Theis (Talk | contribs) uploaded "Image:Cyclopentane.png" (Cyclopentane in envelope conformation)
- 15:02, 4 January 2022 Karsten Theis (Talk | contribs) uploaded "Image:Sugar pucker 441.pdb" (REMARK Morph of nucleotides 3-5 in 1BNA on 1M77 using storymorph REMARK Karsten Theis 1/4/2022 REMARK Atoms C4', O4' and C1' of residue 4 superimposed before morphing )
- 15:01, 4 January 2022 Karsten Theis (Talk | contribs) uploaded "Image:Sugar pucker 412.pdb" (REMARK Morph of nucleotides 3-5 in 1BNA on 1M77 using storymorph REMARK Karsten Theis 1/4/2022 REMARK Atoms O4', C1' and C2' of residue 4 superimposed before morphing )
- 02:38, 4 January 2022 Karsten Theis (Talk | contribs) uploaded "Image:Morph sugarpucker.pdb" (Morph of 1bna and 1m77 nucleotides 3-5 with storymorph. Parameters middle = {4-4 and base} rest = {3-5} and not middle domains = [ [middle], [rest, middle, rest], ])
- 19:45, 3 January 2022 Karsten Theis (Talk | contribs) uploaded a new version of "Image:RNA chemistry.JPG"
- 16:24, 3 January 2022 Karsten Theis (Talk | contribs) uploaded "Image:RNA chemistry.PNG" (Two residues (U and A) in a ribonucleic acid structure, PDB ID 6fz0. The 2' oxygen atoms, not present in DNA, are labeled. )
- 16:19, 3 January 2022 Karsten Theis (Talk | contribs) uploaded "Image:RNA chemistry.JPG" (Two residues (U and A) in a ribonucleic acid structure, PDB ID 6fz0. The 2' oxygen atoms, not present in DNA, are labeled. )
- 19:21, 21 December 2021 Karsten Theis (Talk | contribs) uploaded "Image:467px-DHFR rxn.svg.png" (Reaction catalysed by dihydrofolate reductase. The image in the public domain, available from Wikimedia at https://commons.wikimedia.org/wiki/File:DHFR_rxn.svg)
- 15:01, 6 September 2021 Karsten Theis (Talk | contribs) Carbohydrates moved to Carbohydrate (revert)
- 22:14, 27 August 2021 Karsten Theis (Talk | contribs) uploaded "Image:Alpha.pdb" (REMARK Superposition of 6HBU and 5NJ3 (just C-alpha and ATP in file) REMARK Karsten Theis 8-2-2021 )
- 21:53, 27 August 2021 Karsten Theis (Talk | contribs) uploaded a new version of "Image:Storymorph.spt"
- 18:25, 17 August 2021 Karsten Theis (Talk | contribs) uploaded a new version of "Image:Storymorph.spt"
- 12:58, 16 August 2021 Karsten Theis (Talk | contribs) uploaded a new version of "Image:Mfd domain contacts.JPG"
- 10:23, 16 August 2021 Karsten Theis (Talk | contribs) uploaded "Image:Mfd domain contacts.JPG" (Distinct domain contacts in three conformations of Mfd.)
- 01:21, 16 August 2021 Karsten Theis (Talk | contribs) uploaded "Image:Morph mfd contacts.pdb" ( REMARK C-alpha coordinates of Mfd in 2EYQ and 6X2F REMARK interpolation (14 models) with storymorph REMARK Karsten Theis 8/15/2021 Morph parameters: domains = [ [{4-453},{4-453},{alpha and 4-453},], [{454-478},{454-478},{alpha and 454-478},], [{479-)
- 17:35, 15 August 2021 Karsten Theis (Talk | contribs) uploaded "Image:Mfd domains.JPG" (Snapshot from Mfd translocase)
- 20:34, 14 August 2021 Karsten Theis (Talk | contribs) Mfd translocase moved to Transcription-repair coupling factor over redirect (revert)
- 20:34, 14 August 2021 Karsten Theis (Talk | contribs) Transcription-repair coupling factor moved to Mfd translocase (help searching ) (revert)
- 22:27, 10 August 2021 Karsten Theis (Talk | contribs) uploaded a new version of "Image:Storymorph.spt"
- 15:02, 10 August 2021 Karsten Theis (Talk | contribs) uploaded "Image:Morph recoverin.pdb" (REMARK This is a pseudo-NMR file created with the Storymorph Jmol script. REMARK see proteopedia.org/w/Jmol/Storymorph REMARK Model 1 is 1IKU_7CA.PDB REMARK Model 15 is 1JSA_9CA.PDB REMARK domains = [[{protein and 96-189}],[{protein and 24-95},{96}], )
- 09:35, 10 August 2021 Karsten Theis (Talk | contribs) uploaded "Image:1TRH 1LPM.pdb" (REMARK This is based on a pseudo-NMR file created by Eric Martz's MORPHPDB (c) 1998. REMARK Model 1 is 1TRH.pdb, just protein REMARK Model 2 is 1LPM.pdb, just protein and ligand MPA, after superposition REMARK Karsten Theis 8/10/2021 )
- 11:58, 9 August 2021 Karsten Theis (Talk | contribs) uploaded "Image:Apo hexokinase.pdb" (REMARK Coordinates of apo hexokinase PBD ID 3O80 superposed on 3O8M REMARK Coordinates of glucose from 3O8M appended after moving to arbitrary position REMARK Karsten Theis 4/26/2021 )
- 14:49, 8 August 2021 Karsten Theis (Talk | contribs) uploaded "Image:339px-Beta-Faltblatt.svg.png" (Source: https://commons.wikimedia.org/wiki/File:Beta-Faltblatt.svg)
- 09:27, 7 August 2021 Karsten Theis (Talk | contribs) uploaded "Image:251px-Anthrax toxin protein key motif.svg.png" (Greek key motif. Source: https://commons.wikimedia.org/wiki/File:Anthrax_toxin_protein_key_motif.svg)
- 22:02, 28 July 2021 Karsten Theis (Talk | contribs) uploaded "Image:Plant Physiology 76 175.JPG" (Stack of slices of an electron density map, probably printed on overhead foil and stacked between plexiglass sheets. From Biochemical and X-Ray Diffraction Analysis of Concanavalin B Crystals from Jack Bean, Robert Morrison, Gregory DeLozier, Lindsay Rob)
- 13:32, 2 July 2021 Karsten Theis (Talk | contribs) Jmol/superposition moved to Jmol/Superposition (search engine optimization) (revert)
- 15:36, 21 May 2021 Karsten Theis (Talk | contribs) User:Karsten Theis/Storymorph moved to Jmol/Storymorph (Allow others to edit.) (revert)
- 15:15, 21 May 2021 Karsten Theis (Talk | contribs) uploaded "Image:Morph worked example.gif" (Animated GIF walking through a worked example at User:Karsten_Theis/Storymorph#Worked_examples.)
- 22:08, 17 May 2021 Karsten Theis (Talk | contribs) uploaded a new version of "Image:Storymorph.spt"
- 19:17, 17 May 2021 Karsten Theis (Talk | contribs) uploaded a new version of "Image:Storymorph.spt"
- 16:34, 17 May 2021 Karsten Theis (Talk | contribs) uploaded a new version of "Image:Storymorph.spt"
- 15:58, 17 May 2021 Karsten Theis (Talk | contribs) uploaded a new version of "Image:Storymorph.spt"
- 15:44, 17 May 2021 Karsten Theis (Talk | contribs) uploaded a new version of "Image:Storymorph.spt"
- 02:17, 17 May 2021 Karsten Theis (Talk | contribs) uploaded a new version of "Image:Morph one anchor.gif"
- 02:16, 17 May 2021 Karsten Theis (Talk | contribs) uploaded a new version of "Image:Morph two anchor.gif"
- 23:03, 16 May 2021 Karsten Theis (Talk | contribs) uploaded "Image:Morph two cm.gif"
- 23:03, 16 May 2021 Karsten Theis (Talk | contribs) uploaded "Image:Morph two anchor.gif"
- 23:03, 16 May 2021 Karsten Theis (Talk | contribs) uploaded "Image:Morph one cm.gif"
- 23:02, 16 May 2021 Karsten Theis (Talk | contribs) uploaded "Image:Morph one anchor.gif"
- 12:27, 11 May 2021 Karsten Theis (Talk | contribs) uploaded a new version of "Image:Morph timing t7rnap.pdb" (five steps instead of 20)
- 12:15, 11 May 2021 Karsten Theis (Talk | contribs) uploaded "Image:Morph timing t7rnap.pdb" (Morph between 1QLN and 3E2E)
- 01:35, 5 May 2021 Karsten Theis (Talk | contribs) uploaded "Image:Spike labeled spacefill.gif"
- 01:34, 5 May 2021 Karsten Theis (Talk | contribs) uploaded "Image:Spike labeled spacefill small.gif"
- 14:37, 4 May 2021 Karsten Theis (Talk | contribs) uploaded a new version of "Image:Spike SARS CoV 2 storymorph.pdb"
- 14:24, 4 May 2021 Karsten Theis (Talk | contribs) uploaded "Image:Spike SARS CoV 2 storymorph.pdb" (see remarks in file: REMARK Morph of SARS-CoV-2 spike protein by Karsten Theis 5/4/2021 REMARK based on structures 6xr8 and 6xra, generating 23 intermediates REMARK methods described at proteopedia.org/w/Image:Spike_storymorph.gif )
- 13:51, 4 May 2021 Karsten Theis (Talk | contribs) uploaded "Image:Spike labeled small.gif" (Smaller version of Image:Spike storymorph.gif.)
- 13:21, 4 May 2021 Karsten Theis (Talk | contribs) uploaded "Image:Spike storymorph.gif" (Morph showing a fictional transition from pre-fusion to post-fusion conformation of the SARS-CoV-2 spike protein, based on a superposition of the common C-alpha coordinates by Eric Martz (Image:Morf-6xr8-6xra-theis-cao.pdb).)
- 12:21, 30 April 2021 Karsten Theis (Talk | contribs) uploaded a new version of "Image:Storymorph.spt" (A storyboard approach to morphing molecules using Jmol.)
