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Combined display of all available logs of Proteopedia. You can narrow down the view by selecting a log type, the user name, or the affected page.
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- 23:03, 16 May 2021 Karsten Theis (Talk | contribs) uploaded "Image:Morph two cm.gif"
- 23:03, 16 May 2021 Karsten Theis (Talk | contribs) uploaded "Image:Morph two anchor.gif"
- 23:03, 16 May 2021 Karsten Theis (Talk | contribs) uploaded "Image:Morph one cm.gif"
- 23:02, 16 May 2021 Karsten Theis (Talk | contribs) uploaded "Image:Morph one anchor.gif"
- 12:27, 11 May 2021 Karsten Theis (Talk | contribs) uploaded a new version of "Image:Morph timing t7rnap.pdb" (five steps instead of 20)
- 12:15, 11 May 2021 Karsten Theis (Talk | contribs) uploaded "Image:Morph timing t7rnap.pdb" (Morph between 1QLN and 3E2E)
- 01:35, 5 May 2021 Karsten Theis (Talk | contribs) uploaded "Image:Spike labeled spacefill.gif"
- 01:34, 5 May 2021 Karsten Theis (Talk | contribs) uploaded "Image:Spike labeled spacefill small.gif"
- 14:37, 4 May 2021 Karsten Theis (Talk | contribs) uploaded a new version of "Image:Spike SARS CoV 2 storymorph.pdb"
- 14:24, 4 May 2021 Karsten Theis (Talk | contribs) uploaded "Image:Spike SARS CoV 2 storymorph.pdb" (see remarks in file: REMARK Morph of SARS-CoV-2 spike protein by Karsten Theis 5/4/2021 REMARK based on structures 6xr8 and 6xra, generating 23 intermediates REMARK methods described at proteopedia.org/w/Image:Spike_storymorph.gif )
- 13:51, 4 May 2021 Karsten Theis (Talk | contribs) uploaded "Image:Spike labeled small.gif" (Smaller version of Image:Spike storymorph.gif.)
- 13:21, 4 May 2021 Karsten Theis (Talk | contribs) uploaded "Image:Spike storymorph.gif" (Morph showing a fictional transition from pre-fusion to post-fusion conformation of the SARS-CoV-2 spike protein, based on a superposition of the common C-alpha coordinates by Eric Martz (Image:Morf-6xr8-6xra-theis-cao.pdb).)
- 12:21, 30 April 2021 Karsten Theis (Talk | contribs) uploaded a new version of "Image:Storymorph.spt" (A storyboard approach to morphing molecules using Jmol.)
- 18:18, 28 April 2021 Karsten Theis (Talk | contribs) uploaded "Image:Morph hexokinase2.pdb" (see remarks in file)
- 12:58, 28 April 2021 Karsten Theis (Talk | contribs) uploaded a new version of "Image:Storymorph.spt"
- 12:44, 28 April 2021 Karsten Theis (Talk | contribs) uploaded "Image:Storymorph.spt" (Script with various functions to set up, run and save a morph between two conformations of a molecule. The two molecules can be in the same asymmetric unit, in different models of a file or from two different files as long as the superimposed parts of the)
- 16:51, 13 April 2021 Karsten Theis (Talk | contribs) uploaded a new version of "Image:Morph hexokinase.pdb"
- 15:57, 13 April 2021 Karsten Theis (Talk | contribs) uploaded "Image:Morph hexokinase.pdb"
- 15:09, 13 April 2021 Karsten Theis (Talk | contribs) uploaded "Image:Induced fit.gif" (Morph of hexokinase structure 3O8M and 3O80, treating residues 82-210 as rigid domain anchored at residues 81 and 211. Glucose present in the closed conformation but absent in the open structure is shown in purple, with residues 82-210 in green an)
- 21:46, 11 April 2021 Karsten Theis (Talk | contribs) User:Karsten Theis/Jmol/debugging moved to Jmol/debugging (So others can edit) (revert)
- 20:49, 10 April 2021 Karsten Theis (Talk | contribs) uploaded "Image:Morph.spt" (Macros to morph within Jmol, written by Karsten Theis)
- 19:49, 3 April 2021 Karsten Theis (Talk | contribs) uploaded "Image:Proteopedia Editor Icons.JPG" (Table of icons in the Proteopedia page editor along with explanations and comments.)
- 19:48, 3 April 2021 Karsten Theis (Talk | contribs) uploaded "Image:Proteopedia text editor.JPG" (Table of icons in the Proteopedia page editor along with explanations and comments.)
- 14:47, 3 April 2021 Karsten Theis (Talk | contribs) uploaded a new version of "Image:Proteopedia New Page Annotated.JPG"
- 14:11, 3 April 2021 Karsten Theis (Talk | contribs) uploaded "Image:Proteopedia New Page Annotated.JPG" (When you start a new page in Proteopedia, this is the template that appears. Highlighted are the code that creates the 3D Jmol window (yellow), the green links (green) and the references (tan).)
- 02:45, 22 March 2021 Karsten Theis (Talk | contribs) uploaded "Image:Atp site.pdb" (Multi-model PDB file with 136 ATP binding sites superposed with respect to the adenine moiety.)
- 02:43, 22 March 2021 Karsten Theis (Talk | contribs) uploaded "Image:ILEwriteup2021.pdf" (Independent learning exercises (ILE) for a biochemistry course. Each student is assigned a PDB ID of a protein bound to ATP. Over the course of the semester, students learn about the structure and function of "their" protein. There are 136 structures to c)
- 19:22, 7 March 2021 Karsten Theis (Talk | contribs) uploaded "Image:Swimmers.gif" (Spike protein conformation change, see https://proteopedia.org/wiki/index.php/User:Karsten_Theis/Rigid_body_interpolation)
- 23:07, 6 March 2021 Karsten Theis (Talk | contribs) uploaded "Image:MorphRigid6xr86xra.pdb" (Morph created in Jmol app using this script: function linear(progress) { coord1 = {sel1}.xyz.all coord2 = {sel2}.xyz.all len = coord1.length ssergorp = 1 - progress for (var i FROM [1,len]) {coord1[i] = (coord2[i] * progress + coord1[i] * sserg)
- 15:17, 5 March 2021 Karsten Theis (Talk | contribs) uploaded a new version of "Image:SuperX-6xr8-6xra-theis-cao.pdb"
- 15:13, 5 March 2021 Karsten Theis (Talk | contribs) uploaded "Image:SuperX-6xr8-6xra-theis-cao.pdb" (Variant of Super-6xr8-6xra-theis-cao.pdb with selected residues changed from chain A to chain X)
- 15:08, 5 March 2021 Karsten Theis (Talk | contribs) uploaded "Image:SuperB-6xr8-6xra-theis-cao.pdb" (Adapted from Super-6xr8-6xra-theis-cao.pdb with some residues changed to B chain.)
- 13:24, 5 March 2021 Karsten Theis (Talk | contribs) uploaded "Image:Super-6xr8-6xra-theis-cao.pdb" (See remarks in file: REMARK Superposition of 6xr8 and 6xra REMARK File name: Super-6xr8-6xra-theis-cao.pdb REMARK Adapted from Morf-6xr8-6xra-theis-cao.pdb by rataning first and last model Original file by Eric Martz)
- 16:46, 16 February 2021 Karsten Theis (Talk | contribs) Help:Viewing moved to Help:Viewing pages (revert)
- 16:44, 16 February 2021 Karsten Theis (Talk | contribs) Viewing guide moved to Help:Viewing (Easier to find help page) (revert)
- 15:47, 16 February 2021 Karsten Theis (Talk | contribs) Teaching Strategies Using Proteopedia moved to Help:Teaching with Proteopedia (Make it easier to find when listing all Help: and Proteopedia: pages) (revert)
- 14:54, 11 February 2021 Karsten Theis (Talk | contribs) RNA Polymerase moved to RNA polymerase over redirect (Search engine "optimization") (revert)
- 14:53, 11 February 2021 Karsten Theis (Talk | contribs) RNA polymerase moved to RNA Polymerase (search engine) (revert)
- 14:46, 11 February 2021 Karsten Theis (Talk | contribs) Talk:Rossman fold moved to Talk:Rossmann fold over redirect (correct spelling) (revert)
- 14:46, 11 February 2021 Karsten Theis (Talk | contribs) Rossman fold moved to Rossmann fold over redirect (correct spelling) (revert)
- 14:45, 11 February 2021 Karsten Theis (Talk | contribs) Talk:Rossmann fold moved to Talk:Rossman fold (typos) (revert)
- 14:45, 11 February 2021 Karsten Theis (Talk | contribs) Rossmann fold moved to Rossman fold (typos) (revert)
- 18:01, 15 November 2020 Karsten Theis (Talk | contribs) uploaded a new version of "Image:SAT overview.pdf"
- 19:01, 31 October 2020 Karsten Theis (Talk | contribs) uploaded a new version of "Image:SAT overview.pdf" (This is an overview of the user interface of the scene authoring tools (SAT) of Proteopedia as of 10/31/2020.)
- 18:34, 31 October 2020 Karsten Theis (Talk | contribs) uploaded a new version of "Image:SAT overview.pdf"
- 13:31, 28 October 2020 Karsten Theis (Talk | contribs) uploaded a new version of "Image:ATPdirecttransition.spt"
- 13:19, 28 October 2020 Karsten Theis (Talk | contribs) uploaded "Image:ATPdirecttransition.spt"
- 10:33, 28 October 2020 Karsten Theis (Talk | contribs) uploaded "Image:SAT show.JPG"
- 10:29, 28 October 2020 Karsten Theis (Talk | contribs) uploaded "Image:Structure buttons.JPG"
- 21:53, 27 October 2020 Karsten Theis (Talk | contribs) uploaded "Image:SAT build selection.JPG"
