Anthony Noles Sandbox
From Proteopedia
Contents |
Aconitase
Mechanism of Aconitase
Stage 1: Dehydration
Aconitase (PDB 2b3x) catalyzes the reversible isomerization of citrate and isocitrate. First, dehydration of citrate causes a proton and OH group to be removed from only the 'lower arm'.[1] This forms a cis-Aconitate intermediate.
Show mechanism here!
Aconitase contains 4Fe-4S iron-sulfur cluster. This iron sulfur cluster does not participate in redox as most do, but coordinates the OH goup of citrate to facilitate its elimination.[2]
Stage 2: Rehydration
The second main stage of the reaction is the rehydration of the cis-Aconitate intermediate. This forms isocitrate. It is catalyzed in a stereospecific way such that only one isocitrate stereoisomer is formed. [3]
Show mechanism here!
Thus, the overall reaction that aconitase catalyzes is:
Show total mechanism here!
References
- ↑ Voet, Donald, Judith G. Voet, and Charlotte W. Pratt. Fundamentals of Biochemistry Life at the Molecular Level. New York: John Wiley & Sons, 2008. p. 578. Print.
- ↑ Dupuy J, Volbeda A, Carpentier P, Darnault C, Moulis JM, Fontecilla-Camps JC. Crystal structure of human iron regulatory protein 1 as cytosolic aconitase. Structure. 2006 Jan;14(1):129-39. PMID:16407072 doi:10.1016/j.str.2005.09.009
- ↑ Voet, Donald, Judith G. Voet, and Charlotte W. Pratt. Fundamentals of Biochemistry Life at the Molecular Level. New York: John Wiley & Sons, 2008. p. 579. Print.
External Links
|
