This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2bdz

From Proteopedia

Revision as of 16:22, 29 January 2008 by OCA (Talk | contribs)
(diff) ←Older revision | Current revision (diff) | Newer revision→ (diff)
Jump to: navigation, search

2bdz, resolution 2.100Å

Drag the structure with the mouse to rotate

Mexicain from Jacaratia mexicana

Overview

Mexicain is a 23.7 kDa papain-like cysteine protease from the tropical, plant Jacaratia mexicana. Extracted as a mix of proteases from the latex, of the fruit, mexicain is isolated after cation-exchange chromatography as, the most abundant product. The purified product inhibited with E-64 was, crystallized by sitting-drop vapour diffusion in the presence of, ethanolamine. Cryoprotected crystals diffracted X-rays from a home source, to 1.98 A and belong to the monoclinic space group P2(1), with unit-cell, parameters a = 57.36, b = 90.45, c = 80.39 A, beta = 92.64 degrees . The, asymmetric unit contains four molecules of mexicain, with a corresponding, crystal volume per protein weight (V(M)) of 2.24 A(3) Da(-1) and a solvent, content of 45% by volume. A molecular-replacement model has been, determined and refinement is in progress.

About this Structure

2BDZ is a Single protein structure of sequence from Jacaratia mexicana with as ligand. Full crystallographic information is available from OCA.

Reference

Purification, crystallization and preliminary X-ray analysis of mexicain., Oliver-Salvador MC, Gonzalez-Ramirez LA, Gavira JA, Soriano-Garcia M, Garcia-Ruiz JM, Acta Crystallogr D Biol Crystallogr. 2004 Nov;60(Pt 11):2058-60. Epub 2004, Oct 20. PMID:15502326

Page seeded by OCA on Tue Jan 29 18:22:29 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools