User:Eric Martz/Introduction to Structural Bioinformatics I

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How to find, visualize, and understand 3D protein molecular structures
by Eric Martz, October 2 and 4, 2012
for Prof. Steven Sandler's course Microbiology 565: Laboratory in Molecular Genetics
University of Massachusetts, Amherst MA USA

Protein Structure

1. Amino acid sequence + protein chain conformation = protein function.
A. Conformation can be a stable fold or intrinsically unstructured. Both commonly exist in the same protein molecule.
B. Conformation is determined by sequence.
Folded domains fold spontaneously (Anfinson, 1960's[1]), or with the help of chaperonins.
The denaturation (unfolding) of a folded domain destroys its function.

Notes and References

  1. For a brief overview of Anfinson's protein folding experiments in the 1960's, see the first paragraph at Intrinsically Disordered Protein.

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