1orf
From Proteopedia
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The Oligomeric Structure of Human Granzyme A Reveals the Molecular Determinants of Substrate Specificity
Overview
The cell death-inducing serine protease granzyme A (GzmA) has a unique disulfide-linked quaternary structure. The structure of human GzmA bound to a tripeptide CMK inhibitor, determined at a resolution of 2.4 A, reveals that the oligomeric state contributes to substrate selection by limiting access to the active site for potential macromolecular substrates and inhibitors. Unlike other serine proteases, tetrapeptide substrate preferences do not correlate well with natural substrate cleavage sequences. This suggests that the context of the cleavage sequence within a macromolecular substrate imposes another level of selection not observed with the peptide substrates. Modeling of inhibitors bound to the GzmA active site shows that the dimer also contributes to substrate specificity in a unique manner by extending the active-site cleft. The crystal structure, along with substrate library profiling and mutagenesis, has allowed us to identify and rationally manipulate key components involved in GzmA substrate specificity.
About this Structure
1ORF is a Single protein structure of sequence from Homo sapiens with as ligand. Active as Granzyme A, with EC number 3.4.21.78 Full crystallographic information is available from OCA.
Reference
The oligomeric structure of human granzyme A is a determinant of its extended substrate specificity., Bell JK, Goetz DH, Mahrus S, Harris JL, Fletterick RJ, Craik CS, Nat Struct Biol. 2003 Jul;10(7):527-34. PMID:12819769
Page seeded by OCA on Thu Feb 21 14:20:45 2008
Categories: Granzyme A | Homo sapiens | Single protein | Bell, J K. | Craik, C S. | Fletterick, R J. | Goetz, D H. | Harris, J L. | Mahrus, S. | SO4 | Hydrolase
