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Understanding the structural basis of ribosomal function requires close comparison between biochemical and structural data. Although a large amount of biochemical data are available for the Escherichia coli ribosome, the structure has not been solved to atomic resolution. Using a new RNA homology procedure, we have modeled the all-atom structure of the E. coli 30S ribosomal subunit. We find that the tertiary structure of the ribosome core, including the A-, P- and E-sites, is highly conserved. The hypervariable regions in our structure, which differ from the structure of the 30S ribosomal subunit from Thermus thermophilus, are consistent with the cryo-EM map of the E. coli ribosome.
All-atom homology model of the Escherichia coli 30S ribosomal subunit.,Tung CS, Joseph S, Sanbonmatsu KY Nat Struct Biol. 2002 Oct;9(10):750-5. PMID:12244297[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
↑ Tung CS, Joseph S, Sanbonmatsu KY. All-atom homology model of the Escherichia coli 30S ribosomal subunit. Nat Struct Biol. 2002 Oct;9(10):750-5. PMID:12244297 doi:10.1038/nsb841
