This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1u7e

From Proteopedia

Revision as of 21:06, 30 March 2008 by OCA (Talk | contribs)
Jump to: navigation, search


PDB ID 1u7e

Drag the structure with the mouse to rotate
, resolution 2.00Å
Ligands: , , ,
Gene: Prkaca, Pkaca (Mus musculus), PRKAR1A (Bos taurus)
Activity: Non-specific serine/threonine protein kinase, with EC number 2.7.11.1
Resources: FirstGlance, OCA, PDBsum, RCSB
Coordinates: save as pdb, mmCIF, xml



The crystal structure of a Protein Kinase A complex


Overview

The 2.0-angstrom structure of the cyclic adenosine monophosphate (cAMP)-dependent protein kinase (PKA) catalytic subunit bound to a deletion mutant of a regulatory subunit (RIalpha) defines a previously unidentified extended interface. The complex provides a molecular mechanism for inhibition of PKA and suggests how cAMP binding leads to activation. The interface defines the large lobe of the catalytic subunit as a stable scaffold where Tyr247 in the G helix and Trp196 in the phosphorylated activation loop serve as anchor points for binding RIalpha. These residues compete with cAMP for the phosphate binding cassette in RIalpha. In contrast to the catalytic subunit, RIalpha undergoes major conformational changes when the complex is compared with cAMP-bound RIalpha. The inhibitor sequence docks to the active site, whereas the linker, also disordered in free RIalpha, folds across the extended interface. The beta barrel of cAMP binding domain A, which is the docking site for cAMP, remains largely intact in the complex, whereas the helical subdomain undergoes major reorganization.

About this Structure

1U7E is a Protein complex structure of sequences from Bos taurus and Mus musculus. Full crystallographic information is available from OCA.

Reference

Crystal structure of a complex between the catalytic and regulatory (RIalpha) subunits of PKA., Kim C, Xuong NH, Taylor SS, Science. 2005 Feb 4;307(5710):690-6. PMID:15692043

Page seeded by OCA on Mon Mar 31 00:06:19 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools