1yzc
From Proteopedia
| |||||||
Domains: | cybC | ||||||
Related: | 1YZA
| ||||||
Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||
Coordinates: | save as pdb, mmCIF, xml |
The solution structure of a redesigned apocytochrome B562 (Rd-apocyt b562) with the N- and a part of the C-terminal helices unfolded
Overview
Using native-state hydrogen-exchange-directed protein engineering and multidimensional NMR, we determined the high-resolution structure (rms deviation, 1.1 angstroms) for an intermediate of the four-helix bundle protein: Rd-apocytochrome b562. The intermediate has the N-terminal helix and a part of the C-terminal helix unfolded. In earlier studies, we also solved the structures of two other folding intermediates for the same protein: one with the N-terminal helix alone unfolded and the other with a reorganized hydrophobic core. Together, these structures provide a description of a protein folding pathway with multiple intermediates at atomic resolution. The two general features for the intermediates are (i) native-like backbone topology and (ii) nonnative side-chain interactions. These results have implications for important issues in protein folding studies, including large-scale conformation search, -value analysis, and computer simulations.
About this Structure
1YZC is a Protein complex structure of sequences from Homo sapiens. Full crystallographic information is available from OCA.
Reference
A protein folding pathway with multiple folding intermediates at atomic resolution., Feng H, Zhou Z, Bai Y, Proc Natl Acad Sci U S A. 2005 Apr 5;102(14):5026-31. Epub 2005 Mar 25. PMID:15793003
Page seeded by OCA on Mon Mar 31 01:26:45 2008
Categories: Homo sapiens | Protein complex | BSGC, Berkeley Structural Genomics Center. | Bai, Y. | Feng, H. | Zhou, Z. | Berkeley structural genomics center | Bsgc | Folding intermediate | Native-state hydrogen exchange | Nmr | Protein engineering | Protein structure | Protein structure initiative | Psi | Structural genomic