Structural highlights
8a1h is a 1 chain structure with sequence from Vibrio cholerae. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
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| Method: | X-ray diffraction, Resolution 1.65Å |
| Ligands: | , , , , , , , |
| Resources: | FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT |
Function
Q9KLD7_VIBCH
Publication Abstract from PubMed
Photolyases are flavoproteins, which are able to repair UV-induced DNA lesions in a light-dependant manner. According to their substrate, they can be distinguished as CPD- and (6-4) photolyases. While CPD-photolyases repair the predominantly occurring cyclobutane pyrimidine dimer lesion, (6-4) photolyases catalyse the repair of the less prominent (6-4) photoproduct. The subgroup of prokaryotic (6-4) photolyases/FeS-BCP is one of the most ancient types of flavoproteins in the ubiquitously occurring photolyase & cryptochrome superfamily (PCSf). In contrast to canonical photolyases, prokaryotic (6-4) photolyases possess a few particular characteristics, including a lumazine derivative as antenna chromophore beside the catalytically essential flavin adenine dinucleotide as well as an elongated linker region between the N-terminal alpha/beta-domain and the C-terminal all-alpha-helical domain. Furthermore, they can harbour an additional short subdomain, located at the C-terminus, with a binding site for a [4Fe-4S] cluster. So far two crystal structures of prokaryotic (6-4) photolyases have been reported. Within this study we present the high-resolution structure of the prokaryotic (6-4) photolyase from Vibrio cholerae and its spectroscopic characterization in terms of in vitro photoreduction and DNA-repair activity.
Structural and Functional Analysis of a Prokaryotic (6-4) Photolyase from the Aquatic Pathogen Vibrio Cholerae.,Emmerich HJ, Schneider L, Essen LO Photochem Photobiol. 2023 Jan 24. doi: 10.1111/php.13783. PMID:36692077[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Emmerich HJ, Schneider L, Essen LO. Structural and Functional Analysis of a Prokaryotic (6-4) Photolyase from the Aquatic Pathogen Vibrio Cholerae(†). Photochem Photobiol. 2023 Jan 24. PMID:36692077 doi:10.1111/php.13783