1r47

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1r47, resolution 3.45Å

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Structure of human alpha-galactosidase

Contents

Overview

Fabry disease is an X-linked lysosomal storage disease afflicting 1 in, 40,000 males with chronic pain, vascular degeneration, cardiac impairment, and other symptoms. Deficiency in the lysosomal enzyme alpha-galactosidase, (alpha-GAL) causes an accumulation of its substrate, which ultimately, leads to Fabry disease symptoms. Here, we present the structure of the, human alpha-GAL glycoprotein determined by X-ray crystallography. The, structure is a homodimer with each monomer containing a (beta/alpha)8, domain with the active site and an antiparallel beta domain. N-linked, carbohydrate appears at six sites in the glycoprotein dimer, revealing the, basis for lysosomal transport via the mannose-6-phosphate receptor. To, understand how the enzyme cleaves galactose from glycoproteins and, glycolipids, we also determined the structure of the complex of alpha-GAL, with its catalytic product. The catalytic mechanism of the enzyme is, revealed by the location of two aspartic acid residues (D170 and D231), which act as a nucleophile and an acid/base, respectively. As a point, mutation in alpha-GAL can lead to Fabry disease, we have catalogued and, plotted the locations of 245 missense and nonsense mutations in the, three-dimensional structure. The structure of human alpha-GAL brings Fabry, disease into the realm of molecular diseases, where insights into the, structural basis of the disease phenotypes might help guide the clinical, treatment of patients.

Disease

Known diseases associated with this structure: Fabry disease OMIM:[300644], Fabry disease, cardiac variant OMIM:[300644]

About this Structure

1R47 is a Single protein structure of sequence from Homo sapiens with GAL and EDO as ligands. Active as Alpha-galactosidase, with EC number 3.2.1.22 Full crystallographic information is available from OCA.

Reference

The molecular defect leading to Fabry disease: structure of human alpha-galactosidase., Garman SC, Garboczi DN, J Mol Biol. 2004 Mar 19;337(2):319-35. PMID:15003450

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