1w24
From Proteopedia
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CRYSTAL STRUCTURE OF HUMAN VPS29
Overview
Vacuolar protein sorting protein 29 (Vps29p), which is involved in, retrograde trafficking from prevacuolar endosomes to the trans-Golgi, network, performs its biological functions by participating in the, formation of a "retromer complex." In human cells, this complex comprises, four conserved proteins: hVps35p, hVps29p, hVps26p, and sorting nexin 1, protein (SNX1). Here, we report the crystal structure of hVps29p at 2.1, Angstroms resolution, the first three-dimensional structure of the, retromer subunits. This novel structure adopts a four-layered, alpha-beta-beta-alpha sandwich fold. hVps29p contains a metal-binding site, that is very similar to the active sites of some proteins of the, phosphodiesterase/nuclease protein family, indicating that hVps29p may, carry out chemically similar functions. Structure and sequence, conservation analysis suggests that hVps29p contains two protein-protein, interaction sites. One site, which potentially serves as the interface, between hVps29p and hVps35p, comprises 5 conserved hydrophobic and 8, hydrophilic residues. The other site is relatively more hydrophilic and, may serve as a binding interface with hVps26p, SNX1, or other target, proteins.
About this Structure
1W24 is a Single protein structure of sequence from Homo sapiens. Full crystallographic information is available from OCA.
Reference
Crystal structure of human vacuolar protein sorting protein 29 reveals a phosphodiesterase/nuclease-like fold and two protein-protein interaction sites., Wang D, Guo M, Liang Z, Fan J, Zhu Z, Zang J, Zhu Z, Li X, Teng M, Niu L, Dong Y, Liu P, J Biol Chem. 2005 Jun 17;280(24):22962-7. Epub 2005 Mar 23. PMID:15788412
Page seeded by OCA on Mon Nov 12 19:46:11 2007
