1f5a

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spinqualitylabelsall models 1f5a, resolution 2.5Å Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image

CRYSTAL STRUCTURE OF MAMMALIAN POLY(A) POLYMERASE

Overview

In eukaryotes, polyadenylation of pre-mRNA plays an essential role in the, initiation step of protein synthesis, as well as in the export and, stability of mRNAs. Poly(A) polymerase, the enzyme at the heart of the, polyadenylation machinery, is a template-independent RNA polymerase which, specifically incorporates ATP at the 3' end of mRNA. We have solved the, crystal structure of bovine poly(A) polymerase bound to an ATP analog at, 2.5 A resolution. The structure revealed expected and unexpected, similarities to other proteins. As expected, the catalytic domain of, poly(A) polymerase shares substantial structural homology with other, nucleotidyl transferases such as DNA polymerase beta and kanamycin, transferase. The C-terminal domain unexpectedly folds into a compact, domain reminiscent of the RNA-recognition motif fold. The three invariant, aspartates of the catalytic triad ligate two of the three active site, metals. One of these metals also contacts the adenine ring. Furthermore, conserved, catalytically important residues contact the nucleotide. These, contacts, taken together with metal coordination of the adenine base, provide a structural basis for ATP selection by poly(A) polymerase.

About this Structure

1F5A is a Single protein structure of sequence from Bos taurus with MN, 3AT and 3PO as ligands. Active as Polynucleotide adenylyltransferase, with EC number 2.7.7.19 Full crystallographic information is available from OCA.

Reference

Crystal structure of mammalian poly(A) polymerase in complex with an analog of ATP., Martin G, Keller W, Doublie S, EMBO J. 2000 Aug 15;19(16):4193-203. PMID:10944102

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