1orv

From Proteopedia

proteopedia linkproteopedia link

spinqualitylabelsall models 1orv, resolution 1.80Å Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image

Crystal Structure of Porcine Dipeptidyl Peptidase IV (CD26)

Overview

The membrane-bound glycoprotein dipeptidyl peptidase IV (DP IV, CD26) is a, unique multifunctional protein, acting as receptor, binding and, proteolytic molecule. We have determined the sequence and 1.8 A crystal, structure of native DP IV prepared from porcine kidney. The crystal, structure reveals a 2-2-2 symmetric tetrameric assembly which depends on, the natively glycosylated beta-propeller blade IV. The crystal structure, indicates that tetramerization of DP IV is a key mechanism to regulate its, interaction with other components. Each subunit comprises two structural, domains, the N-terminal eight-bladed beta-propeller with open Velcro, topology and the C-terminal alpha/beta-hydrolase domain. Analogy with the, structurally related POP and tricorn protease suggests that substrates, access the buried active site through the beta-propeller tunnel while, products leave the active site through a separate side exit. A dipeptide, mimicking inhibitor complexed to the active site discloses key, determinants for substrate recognition, including a Glu-Glu motif that, distinguishes DP IV as an aminopeptidase and an oxyanion trap that binds, and activates the P(2)-carbonyl oxygen necessary for efficient postproline, cleavage. We discuss active and nonactive site-directed inhibition, strategies of this pharmaceutical target protein.

About this Structure

1ORV is a Single protein structure of sequence from Sus scrofa with NAG and SO4 as ligands. Active as Dipeptidyl-peptidase IV, with EC number 3.4.14.5 Full crystallographic information is available from OCA.

Reference

The crystal structure of dipeptidyl peptidase IV (CD26) reveals its functional regulation and enzymatic mechanism., Engel M, Hoffmann T, Wagner L, Wermann M, Heiser U, Kiefersauer R, Huber R, Bode W, Demuth HU, Brandstetter H, Proc Natl Acad Sci U S A. 2003 Apr 29;100(9):5063-8. Epub 2003 Apr 10. PMID:12690074

Page seeded by OCA on Tue Nov 20 23:08:26 2007