Porin 3D structures

From Proteopedia

3D structures of Porin

Updated on 05-September-2023

OmpA

3nb3 – EcOmpA + EcOmpC – Escherichia coli – EM

1bxw, 1qjp – EcOmpA transmembrane domain (mutant)

2jmm – EcOmpA transmembrane domain - NMR

1g90, 2ge4 – EcOmpA transmembrane domain (mutant) - NMR

2kgw – MtOmpA C terminal residues 198-326– Mycobacterium tuberculosis – NMR

2ksm – MtOmpA BON domain residues 73-203 – NMR

2l26 – MtOmpA residues 75-326 – NMR

2k0l – KpOmpA transmembrane domain – Klebsiella pneumoniae - NMR

4erh – SeOmpA residues 205-349 – Salmonella enterica

5jir – OmpA-OmpF – Treponema pallidum

OmpB

3vzt – NmOmpB – Neisseria meningitides

7de8 – NmOmpB (mutant)

3a2s, 3vzw – NmOmpB+sugars

3vzu - NmOmpB+AMPPNP

4gey, 4gf4 – OmpB – Pseudomonas putida

OmpC

2xe5, 2xe1, 2xe2, 2xe3, 2j1n, 2xg6 – EcOmpC

7jz3 - EcOmpC – Cryo EM

2zle - EcOmpC + protease DO – EM

4a8d - EcOmpC + DEGP – EM

2j4u – EcOmpC+lactotransferrin fragment

3upg, 3uu2 – SeOmpC

5fvn – EncOmpC – Enterobacter cloacae

OmpF

3k19, 3k1b, 2zfg, 2omf, 1opf, 3poq, 3pou, 3pox, 4jfb, 4lse, 4lsf, 4lsh, 4lsi, 4d5u, 7fdy, 8c7l – EcOmpF

6wtz – EcOmpF – Cryo EM

1hxt, 1hxu, 1hxx, 1bt9, 1gfm, 1gfn, 1gfo, 1gfp, 1gfq, 1mpf – EcOmpF (mutant)

5nur, 5nuo – EcOmpF + ABC transprter permease

5nuq – EcOmpF + MLAA

2zld – EcOmpF+colicin E3

7nst – EcOmpF+colicin E9 + TolB – Cryo EM

7nsu – EcOmpF+colicin E9 + TolB + BtuB – Cryo EM

3o0e - EcOmpF+colicin peptide

3hw9, 3hwb – EcOmpF+ions

3fyx – EcOmpF+dibenzo-18-crown-6

4gcp, 4gcq, 4gcs, 6zhp, 6zhv – EcOmpF + antibiotic

3nsg – StOmpF - Salmonella typhimurium

4kr4, 4kr8, 4kra – StOmpF + antibiotics

6ene – EncOmpF

OmpG

2iwv, 2iww, 2f1c, 4ctd, 7q5c – EcOmpG

2x9k, 2wvp - EcOmpG (mutant)

2jqy, 6oqh – EcOmpG - NMR

OmpK

1osm, 6rck, 6rcp, 6rd3 – KpOmpK36

6rcp – KpOmpK36 (mutant)

5nup – KpOmpK36 + ABC transporter permease

6v78 – KpOmpK37

OmpM

5ldt – CjOmpM – Campylobacter jejuni

5ldv – CjOmpM (mutant)

OmpR

1opc - EcOmpR C terminal

OmpT

5oyk, 6ehd, 6ehf - VcOmpT – Vibrio cholerae

OmpU

6ehb, 5onu - VcOmpU

6ehc - VcOmpU (mutant)

Omp32

2fgr - DaOmp32 – Delftia acidovorans

2fgq – DaOmp32+malate

1e54 – Omp32+sulfate – Comamonas acidovorans

Omp33

6gie – AbOmp33 – Acinetobacter baumannii

Omp35

5o78 – Omp35 – Enterobacter aerogenes

OprB

4gf4, 4gey – PaOprB – Pseudomonas aeruginosa

OprD

2odj, 3sy7, 4foz – PaOprD

OprE

4frx – PaOprE

OprF

3szd – PaOprF

4rlc – PaOprF N terminal

5u1h – PaOprF C terminal

OprG

2x27 - PaOprG

OprH

2lhf – PaOprH - NMR

OprK

2qtk, 2y2x, 3sys – PaOprK

OprL

3t0s - PaOprL

OprM

3d5k, 1wp1, 4y1k - PaOprM

OprO

4rjw - PaOprO

4rjx – PaOprO (mutant)

OprP

2o4v – PaOprP+phosphate

OprQ

3t24 – PaOprQ

OpdC (histidine porin)

3sy9 – PaOprC

OpdH (cis-aconitate porin)

3t20 – PaOprH

OpdL

2y0h – PaOpdL

OpdO (pyroglutatmate porin)

2y0k, 2y0l, 3szv – PaOpdO

OpdP (glycine-glutamate dipeptide porin)

3syb – PaOpdP

Omp

1pho - EcOmp

3jty – Omp – Pseudomonas fluorescens

2v9u – MsOmp rim domain – Mycobacteria smegmatis

1uun – MsOmp (mutant)

2prn, 1bh3, 3prn, 5prn, 6prn, 7prn, 8prn – RbOmp (mutant) - Rhodopseudomonas blastica

1prn – RbOmp

1h6s – RbOmp+inserted sequence

2por, 3por – Omp – Rhodobacter capsulatus

4aui – Omp – Neisseria gonorrheae

4fqe – DdOmp KDGM – Dickeya dadantii

4pr7 – DdOmp KDGM + oligogalactouronate

4d64, 5nxr – PsOmp 1 – Providencia stuartii

5nxn – PsOmp 1 (mutant)

5n9i, 5n9h – PsOmp 1 dimerization domain

5nxu – PsOmp 1 + maltose

4d65 – PsOmp 2

4fuv, 5dl7 – AbOmp

Sugar-specific porin

1a0s – StOmp

1oh2, 1a0t – StOmp+sucrose

Maltoporin

1mal – EcLamB

8b7v – EcLamB – Cryo EM

1af6, 1mpq, 1mpm, 1mpn, 1mpo – EcLamB+sugars

2mpr, 1mpr – StLamB

Chitoporin

7vu2, 7vu3 – SmChitp + chitohexaose – Serratia marcescens

7vtz, 7vu0, 7vu1 – EcChitp + chitohexaose

5ndp, 5mdq, 5mds – VhChitp – Vibrio harveyi

5mdo, 5mdr, 7eqm, 7eqr – VhChitp + chitohexaose

7x5q – VhChitp + chitohexaose + peptide

7x5p – VhChitp + chitohexaose + doxycycline

Voltage-Dependent Anion Channel

See Ion channels