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Talk:Base stacking
From Proteopedia
Scripts used to make the figures
# intercalation load =3k5y restrict none select protein backbone on select within(group, within(3.5, base)) and (*.CA or sidechain) wireframe 0.3 color cpk select nucleic color cpk wireframe 0.3 spacefill 0.5 select base color red spacefill 100% load =1yxp # kissing loop select all cartoon only select 10-16 and base spacefill on select :B color green select :A color orange load =4c64 #dodecamer restrict none select all cartoon only color gray select base spacefill on color skyblue select (1,3,5,7,9,11,14,16,18,20,22,24) and base color coral
