All logs
From Proteopedia
Combined display of all available logs of Proteopedia. You can narrow down the view by selecting a log type, the user name, or the affected page.
View (previous 50) (next 50) (20 | 50 | 100 | 250 | 500)
- 02:27, 12 October 2025 Karsten Theis (Talk | contribs) uploaded "Image:MOFhexagonal.png" (CSD Entry: QEKBAK)
- 19:34, 2 June 2025 Karsten Theis (Talk | contribs) uploaded "Image:1msw legend.png"
- 16:57, 2 June 2025 Karsten Theis (Talk | contribs) uploaded "Image:1MSW butterfly.png"
- 02:02, 21 May 2025 Karsten Theis (Talk | contribs) uploaded a new version of "Image:Uvrb fancy.spt"
- 01:57, 21 May 2025 Karsten Theis (Talk | contribs) uploaded "Image:Uvrb fancy.spt" (Testing a concept of selecting the next scene by rotation)
- 16:00, 9 May 2025 Karsten Theis (Talk | contribs) uploaded a new version of "Image:Molecular playground helpers.spt"
- 14:24, 6 May 2025 Karsten Theis (Talk | contribs) uploaded "Image:Cellulose.spt" (Molecular Playground script, cellulose)
- 14:07, 6 May 2025 Karsten Theis (Talk | contribs) uploaded "Image:Cellulose.pngj" (Opening scene for cellulose molecular playground exhibit.)
- 15:28, 3 May 2025 Karsten Theis (Talk | contribs) uploaded a new version of "Image:UvrB tour.spt"
- 15:26, 3 May 2025 Karsten Theis (Talk | contribs) uploaded a new version of "Image:UvrB tour.spt" (smoother rotation)
- 15:12, 3 May 2025 Karsten Theis (Talk | contribs) uploaded "Image:UvrB tour.spt" (Script to visit 3 features of the UvrB protein)
- 14:59, 3 May 2025 Karsten Theis (Talk | contribs) uploaded a new version of "Image:UvrB 1d9z.spt" (With banner)
- 14:56, 3 May 2025 Karsten Theis (Talk | contribs) uploaded "Image:UvrB 1d9z.spt" (Basic script to load Molecular Playground helper functions and PNGJ file containing initial scene. You would add to this script to add more scenes.)
- 14:43, 3 May 2025 Karsten Theis (Talk | contribs) uploaded a new version of "Image:Benzene cyclohexane.spt" (Loads and calls helper functions now; works onsite, offsite, and offline (assuming the PNGJ and the helper file are in the same directory).)
- 13:37, 3 May 2025 Karsten Theis (Talk | contribs) uploaded "Image:Uvrb 1d9z.pngj" (Example pngj file)
- 13:26, 3 May 2025 Karsten Theis (Talk | contribs) uploaded "Image:Molecular playground helpers.spt" (Helper functions to show molecular playground scenes in applet (online) or app (offline).)
- 02:20, 2 May 2025 Karsten Theis (Talk | contribs) uploaded a new version of "Image:Benzene cyclohexane.spt" (delay2play function now prompts to use hands (molecular playground) or mouse (applet on Proteopedia))
- 01:43, 2 May 2025 Karsten Theis (Talk | contribs) uploaded "Image:Benzene cyclohexane.spt"
- 20:52, 1 May 2025 Karsten Theis (Talk | contribs) uploaded "Image:Hexes2.pngj" (pngj file with benzene and hexane)
- 12:17, 10 April 2025 Karsten Theis (Talk | contribs) uploaded a new version of "Image:Storymorph.spt"
- 11:39, 10 April 2025 Karsten Theis (Talk | contribs) uploaded a new version of "Image:Storymorph.spt" (Simplified user interface for extrapolation. timing = -2.0, 3.0 means to extrapolate 2x the difference past conformation 1, and 3x the difference past conformation 2. [0.0, 2.0] extrapolates past conformation 2 only, and [-1.0, 1.0] past conformation )
- 18:57, 31 March 2025 Karsten Theis (Talk | contribs) uploaded "Image:1a1v on 1d9z 1-411.pdb" (REMARK Multi-model file containing a superposition of two crystal structures REMARK MODEL 1 is 1D9Z, MODEL 2 is 1A1V (NS3 Helicase with ssDNA bound) REMARK 1A1V was superimposed on residues 1-411 or 1D9Z using Pymol's align command REMARK Kars)
- 19:11, 27 March 2025 Karsten Theis (Talk | contribs) uploaded "Image:Off by one.png" (troubleshooting 2025 Proteopedia)
- 18:35, 11 February 2025 Karsten Theis (Talk | contribs) uploaded a new version of "Image:Turn 2mhr 67 70.pdb" (with header)
- 20:32, 8 February 2025 Karsten Theis (Talk | contribs) uploaded "Image:Turn 2mhr 67 70.pdb" (REMARK Residues 67 through 70 from PDB 2mhr REMARK removed ATOM 1160 HG SER A 68 25.482 30.843 7.303 1.00 26.79 H REMARK because Jmol connects it to its hydrogen bond acceptor REMARK Karsten Theis 2_8_2025)
- 17:07, 8 February 2025 Karsten Theis (Talk | contribs) uploaded a new version of "Image:Beta turn type I.png" (Change orientation to be closer to mirror image of type I', Image:Beta_turn_type_I_prime.png.)
- 13:36, 8 February 2025 Karsten Theis (Talk | contribs) uploaded "Image:Turn.pdb" (long story)
- 19:26, 7 February 2025 Karsten Theis (Talk | contribs) uploaded "Image:Beta turn type I prime.png" (Type I prime beta turn on the left, with Ramachandran plot on the right. Made from https://proteopedia.org/wiki/index.php/User:Karsten_Theis/turns)
- 19:25, 7 February 2025 Karsten Theis (Talk | contribs) uploaded "Image:Beta turn type I.png" (Type I beta turn on the left, with Ramachandran plot on the right. Made from https://proteopedia.org/wiki/index.php/User:Karsten_Theis/turns)
- 22:02, 30 January 2025 Karsten Theis (Talk | contribs) uploaded "Image:Super2ptn 2tgt.pdb" (Superposition of 2ptn and 2tgt (bovine trypsin and trypsinogen). Details are in the header of the file.)
- 21:40, 25 January 2025 Karsten Theis (Talk | contribs) uploaded "Image:Ligand 3ljj ProteinPlus.png" (Interactions between trypsin and a small-molecule trypsin inhibitor, PDB code 3ljj. Created with PoseEdit at https://proteins.plus/1y3v (ZBH U Hamburg). )
- 20:51, 25 January 2025 Karsten Theis (Talk | contribs) uploaded "Image:Ligand 1y3v ProteinsPlus.png" (Interactions between trypsin and a small-molecule trypsin inhibitor, PDB code 1y3v. Created with PoseEdit at https://proteins.plus/1y3v (ZBH U Hamburg).)
- 19:12, 24 January 2025 Karsten Theis (Talk | contribs) uploaded "Image:DNA grooves.png" (view of major and minor grooves, based on 10/100853/Grooves/2.spt.)
- 20:34, 20 December 2024 Karsten Theis (Talk | contribs) uploaded a new version of "Image:GLP1 helix propensity.PNG"
- 20:32, 20 December 2024 Karsten Theis (Talk | contribs) uploaded a new version of "Image:GLP1 helix propensity.PNG"
- 17:24, 20 December 2024 Karsten Theis (Talk | contribs) uploaded "Image:GLP1 helix propensity.PNG" (Graph showing the relative helix-propensity (according to the Chou & Fasman scale) of amino acid residues in GLP-1 (7-37). The parameters are taken from https://web.expasy.org/protscale/ and used without averaging over a window. Instead of giving numerica)
- 16:20, 20 December 2024 Karsten Theis (Talk | contribs) Wegovy moved to Ozempit (revert)
- 16:18, 20 December 2024 Karsten Theis (Talk | contribs) Ozempic moved to Wegovy (revert)
- 16:18, 20 December 2024 Karsten Theis (Talk | contribs) Semaglutide moved to Ozempic (revert)
- 20:15, 19 December 2024 Karsten Theis (Talk | contribs) GLP-1R moved to Glucagon-like peptide 1 receptor over redirect (easier search) (revert)
- 20:14, 19 December 2024 Karsten Theis (Talk | contribs) Glucagon-like peptide 1 receptor moved to GLP-1R (easier search) (revert)
- 20:13, 19 December 2024 Karsten Theis (Talk | contribs) uploaded "Image:GLP1R.gif" (Morph of the extracellular domain (yellow) of the GLP-1 receptor between a conformation with GLP-1 (green) bound and without (structures 5vai and 6ln2). For simplicity, the trans-membrane domain (red) was not morphed. )
- 19:18, 19 December 2024 Karsten Theis (Talk | contribs) uploaded "Image:GLP1R conformations.png" (Sketch of GLP-1 receptor conformations, inspired by https://www.nature.com/articles/s41467-020-14934-5 (Fig. 7).)
- 16:59, 19 December 2024 Karsten Theis (Talk | contribs) uploaded "Image:Semaglutide Artwork.PNG" (Artists rendition of 4zgm, with semaglutide in blue, the extra-cellular domain of the GLP-1 receptor in orange, and a PEC molecule use in crystallization in black ball-and-stick.)
- 21:50, 18 December 2024 Karsten Theis (Talk | contribs) uploaded "Image:GLP1 DPP4 processing.png" (Sequence of GLP-1 (7-37) and site of hydrolysis by DPP-4)
- 21:43, 18 December 2024 Karsten Theis (Talk | contribs) uploaded "Image:GLP-1 semaglutide.png" (Modified version of https://commons.wikimedia.org/wiki/File:Tirzepatide%2BSemaglutide_vs._GLP-1_GIP.svg)
- 18:42, 11 December 2024 Karsten Theis (Talk | contribs) uploaded "Image:Semaglutide side effects.png" (Committee for Medicinal Products for Human use (CHMP). European Medicines Agency (EMA). (2018). https://www.ema.europa.eu/en/documents/assessment-report/ozempic-epar-public-assessment-report_en.pdf )
- 03:48, 10 December 2024 Karsten Theis (Talk | contribs) Glucagon-like peptide 1 moved to GLP-1 over redirect (help with search) (revert)
- 03:48, 10 December 2024 Karsten Theis (Talk | contribs) GLP-1 moved to Glucagon-like peptide 1 (help with search) (revert)
- 16:00, 7 December 2024 Karsten Theis (Talk | contribs) uploaded "Image:AF-P01274-F1-model v4.cif" (Pro-glucagon predicted structure, AlphaFold DB: AF-P01274-F1 Released in AlphaFold DB: 2021-12-09 Last Modified in AlphaFold DB: 2022-09-30 Organism(s): Sus scrofa)
