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From Proteopedia
Structure of Xenopus cholinephosphotransferase1 in complex with CDP
Structural highlights
FunctionCHPT1_XENLA Catalyzes the final step of de novo phosphatidylcholine (PC) synthesis, i.e. the transfer of choline phosphate from CDP-choline to the free hydroxyl of a diacylglycerol (DAG), producing a PC (PubMed:37179328). It thereby plays a central role in the formation and maintenance of vesicular membranes (By similarity). Shows a high preference for CDP-choline over CDP-ethanolamine as substrate (PubMed:37179328).[UniProtKB:Q8WUD6][1] Publication Abstract from PubMedPhosphatidylcholine (PC) is the most abundant phospholipid in eukaryotic cell membranes. In eukaryotes, two highly homologous enzymes, cholinephosphotransferase-1 (CHPT1) and choline/ethanolamine phosphotransferase-1 (CEPT1) catalyze the final step of de novo PC synthesis. CHPT1/CEPT1 joins two substrates, cytidine diphosphate-choline (CDP-choline) and diacylglycerol (DAG), to produce PC, and Mg(2+) is required for the reaction. However, mechanisms of substrate recognition and catalysis remain unresolved. Here we report structures of a CHPT1 from Xenopus laevis (xlCHPT1) determined by cryo-electron microscopy to an overall resolution of ~3.2 A. xlCHPT1 forms a homodimer, and each protomer has 10 transmembrane helices (TMs). The first 6 TMs carve out a cone-shaped enclosure in the membrane in which the catalysis occurs. The enclosure opens to the cytosolic side, where a CDP-choline and two Mg(2+) are coordinated. The structures identify a catalytic site unique to eukaryotic CHPT1/CEPT1 and suggest an entryway for DAG. The structures also reveal an internal pseudo two-fold symmetry between TM3-6 and TM7-10, and suggest that CHPT1/CEPT1 may have evolved from their distant prokaryotic ancestors through gene duplication. Structure of a eukaryotic cholinephosphotransferase-1 reveals mechanisms of substrate recognition and catalysis.,Wang L, Zhou M Nat Commun. 2023 May 13;14(1):2753. doi: 10.1038/s41467-023-38003-9. PMID:37179328[2] From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine. References
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