Sandbox jmu01

We can clean up the structure some by creating a view .

This article describes the crystallization of HIV Protease with various inhibitors including the K13 inhibitor shown in this structure. ^[1]

Here I have highlighted key nonpolar residues in the that make van der Waals interactions with K13. The inhibitor has a longer hydrophobic region so it binds tighter here.

Here is a space-filling representation with

Hydrophobic, Polar