User contributions
From Proteopedia
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- 14:34, 30 April 2014 (hist) (diff) Lauren Ferris/Sandbox 2 (top)
- 14:33, 30 April 2014 (hist) (diff) Lauren Ferris/Sandbox 2
- 14:32, 30 April 2014 (hist) (diff) Lauren Ferris/Sandbox 2
- 14:31, 30 April 2014 (hist) (diff) Lauren Ferris/Sandbox 2
- 14:10, 30 April 2014 (hist) (diff) Lauren Ferris/Sandbox 2
- 13:50, 30 April 2014 (hist) (diff) Lauren Ferris/Sandbox 2
- 12:13, 30 April 2014 (hist) (diff) Lauren Ferris/Sandbox 2
- 12:10, 30 April 2014 (hist) (diff) Lauren Ferris/Sandbox 2
- 12:08, 30 April 2014 (hist) (diff) Lauren Ferris/Sandbox 2
- 12:06, 30 April 2014 (hist) (diff) Lauren Ferris/Sandbox 2
- 12:04, 30 April 2014 (hist) (diff) Lauren Ferris/Sandbox 2
- 12:02, 30 April 2014 (hist) (diff) Lauren Ferris/Sandbox 2
- 12:00, 30 April 2014 (hist) (diff) Image:DNA T4-6.jpg (Interactions between DdrB and T4-T6. (PDB: 4HQB) This figure was generated using Pymol.) (top)
- 11:59, 30 April 2014 (hist) (diff) Lauren Ferris/Sandbox 2
- 11:52, 30 April 2014 (hist) (diff) Image:Pentamer-pentamer.jpg (Model of the pentamer-pentamer structure. (PDB: 4HQB) This figure was generated using Pymol.) (top)
- 11:48, 30 April 2014 (hist) (diff) Lauren Ferris/Sandbox 2
- 11:44, 30 April 2014 (hist) (diff) Image:Alignment.jpg (Alignment of the crystal structures of Deinococcus radiodurans and Deinococcus geothermalis. (A.) Alignment of chains c, (B.) Alignment of Chains a with DNA, (C.) Alignment of the pentamer. (PDB: 4EXW and 4HQB) This figure was generated using Pymol.) (top)
- 11:42, 30 April 2014 (hist) (diff) Image:A chains.jpg (The pentamer-pentamer interface is also stabilized by salt bridges and hydrogen bonds between the A chainds. (PDB:4HQB) This figure was generated using Pymol.) (top)
- 11:41, 30 April 2014 (hist) (diff) Image:E loop.jpg (The pentamer-pentamer interactions are stabilized by interactions involving the hairpin of chain E. (PDB:4HQB). This figure was generated using Pymol.) (top)
- 11:39, 30 April 2014 (hist) (diff) Image:T7-8.jpg (Interactions between DdrB and T7 and T8. (PDB: 4HQB) This figure was generated using Pymol.) (top)
- 11:35, 30 April 2014 (hist) (diff) Image:T1-3.jpg (Interactions between DdrB and T1-T3. (PDB: 4HQB) This figure was generated using Pymol.) (top)
- 11:33, 30 April 2014 (hist) (diff) Image:Electrostatics pentamer.jpg (The electrostatic charges in the DdrB pentamer. Blue represents positive charges, while red represents negative charges. A positive “track” around the top of the pentamer may enable ssDNA binding to one side of the pentamer (left image). (PDB: 4HQB)) (top)
- 11:32, 30 April 2014 (hist) (diff) Image:Electrostatics monomer.jpg (The electrostatic charges in the DdrB monomer. Blue represents positive charges, while red represents negative charges. (PDB: 4HQB). This figure was generated using Pymol.) (top)
- 11:29, 30 April 2014 (hist) (diff) Image:OB fold.jpg (This figure highlights the differences between the classic OB fold found in single-stranded binding proteins and the novel structural features of DdrB. The OB fold is observed in the protein verotoxin-1, PDB code 2XSC . DdrB is modeled from the PDB stru) (top)
- 11:28, 30 April 2014 (hist) (diff) Lauren Ferris/Sandbox 2
- 14:14, 28 April 2014 (hist) (diff) Lauren Ferris/Sandbox 2
- 14:11, 28 April 2014 (hist) (diff) Lauren Ferris/Sandbox 2
- 14:08, 28 April 2014 (hist) (diff) Lauren Ferris/Sandbox 2
- 14:07, 28 April 2014 (hist) (diff) Lauren Ferris/Sandbox 2
- 14:05, 28 April 2014 (hist) (diff) Lauren Ferris/Sandbox 2
- 14:04, 28 April 2014 (hist) (diff) Lauren Ferris/Sandbox 2
- 13:58, 28 April 2014 (hist) (diff) Lauren Ferris/Sandbox 2
- 13:54, 28 April 2014 (hist) (diff) Image:Models.jpg (From 4HQB. This was generated using pymol.) (top)
- 13:50, 28 April 2014 (hist) (diff) Lauren Ferris/Sandbox 2
- 13:48, 28 April 2014 (hist) (diff) Lauren Ferris/Sandbox 2
- 13:43, 28 April 2014 (hist) (diff) Lauren Ferris/Sandbox 2
- 13:39, 28 April 2014 (hist) (diff) Image:DNA channel.jpg (From 4HQB. This was made using Pymol) (top)
- 13:38, 28 April 2014 (hist) (diff) Lauren Ferris/Sandbox 2
- 13:36, 28 April 2014 (hist) (diff) Lauren Ferris/Sandbox 2
- 13:31, 28 April 2014 (hist) (diff) Lauren Ferris/Sandbox 2
- 13:28, 28 April 2014 (hist) (diff) Lauren Ferris/Sandbox 2
- 13:21, 28 April 2014 (hist) (diff) Lauren Ferris/Sandbox 2
- 13:06, 28 April 2014 (hist) (diff) Lauren Ferris/Sandbox 2
- 12:53, 28 April 2014 (hist) (diff) Lauren Ferris/Sandbox 2
- 12:35, 28 April 2014 (hist) (diff) Lauren Ferris/Sandbox 2
- 12:29, 28 April 2014 (hist) (diff) Lauren Ferris/Sandbox 2
- 07:13, 28 April 2014 (hist) (diff) Lauren Ferris/Sandbox 2
- 06:59, 28 April 2014 (hist) (diff) Lauren Ferris/Sandbox 2
- 06:56, 28 April 2014 (hist) (diff) Lauren Ferris/Sandbox 2
- 06:25, 28 April 2014 (hist) (diff) Lauren Ferris/Sandbox 2
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