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Article title matches

1. Image:Ligand tunnel.png (0 bytes)
2. Image:Ligand overlay.pdb (0 bytes)
3. Category:Dansyl ligand (44 bytes)
   1: List of pages with the keyword Dansyl ligand
4. Tumor necrosis factor ligand superfamily 3D structures (3,641 bytes)
   1: ==3D structures of tumor necrosis factor ligand superfamily==
   3: ...iption of the protein see [[Tumor necrosis factor ligand superfamily]]
   6: * Tumor necrosis factor ligand superfamily member 1 (Lymphotoxin-beta)
   10: * Tumor necrosis factor ligand superfamily member 2 see [[Tumor necrosis factor]...
   12: * Tumor necrosis factor ligand superfamily member 3 (Lymphotoxin-alpha)
5. Ligand (2,978 bytes)
   1: ... substrate or inhibitor ligands. Avidin binds the ligand biotin.
   3: ...dia places beneath molecules under the category ''Ligands'' are based on a somewhat different definition, ...
   5: In macromolecular structure, ligand has a '''specialized and somewhat different meani...
   7: ... addition to moieties ordinarily considered to be ligand, such as metal ions and small organic compounds o...
   9: ...[Non-Standard Residues|non-standard residues]] as ligand, which avoid them being invisible in a backbone-o...
6. Category:Ligand binding (50 bytes)
   1: List of structures with the keyword Ligand binding
7. Category:Protein-ligand complex (58 bytes)
   1: List of structures with the keyword Protein-ligand complex
8. Category:Ligand-binding domain (52 bytes)
   1: List of pages with the keyword Ligand-binding domain
9. Category:Retinoid ligand complex (54 bytes)
   1: List of pages with the keyword Retinoid ligand complex
10. Category:Transcriptionally active conformation in absence of ligand (89 bytes)
    1: ...anscriptionally active conformation in absence of ligand
11. Category:Ligand-dependent (47 bytes)
    1: List of pages with the keyword Ligand-dependent
12. Category:Beta ligand substitution (55 bytes)
    1: List of pages with the keyword Beta ligand substitution
13. Category:Ligand binding protein (53 bytes)
    1: List of pages with the keyword Ligand binding protein
14. Category:Enzyme-ligand complex (52 bytes)
    1: List of pages with the keyword Enzyme-ligand complex
15. Category:Ligand (37 bytes)
    1: List of pages with the keyword Ligand
16. Category:Rna-ligand interaction (53 bytes)
    1: List of pages with the keyword Rna-ligand interaction
17. Category:Ligand of annexin ii (51 bytes)
    1: List of pages with the keyword Ligand of annexin ii
18. Category:Ligand binding geometry (54 bytes)
    1: List of pages with the keyword Ligand binding geometry
19. Category:Intermediate in ligand binding (61 bytes)
    1: List of pages with the keyword Intermediate in ligand binding
20. Category:Ligand induced conformational change (67 bytes)
    1: List of pages with the keyword Ligand induced conformational change

Page text matches

1. Help:Editing (24,612 bytes)
   19: ...age is in a [[Help:Sandboxes|protected sandbox]]. After it is completed, you can move the contents to ...
   46: ...[[Scene authoring tools|Scene Authoring Tools]]. After you create a scene, you must insert it using t...
   133: {{Template:ColorKey Composition Ligand}}
   165: ...t;''' (note the slash!). Typically this is placed after a title such as <nowiki>==References==</nowiki...
   169: ...lecular visualization, [[Chime]] was very popular after its release in 1996, but in recent years, the ...
2. Acetylcholinesterase (8,905 bytes)
   8: ...ia.org/wiki/Substrate_(biochemistry) substrate] traffic, recognition and hydrolysis.<ref>PMID:10545346...
   13: ...recognition <ref name="Raves">PMID:8989325</ref>. After this binding acetylcholinesterase <scene name=...
   25: ... with concomitant departure of its fluoride atom. After that AChE catalyzes the <scene name='2wfz/Al/9...
   26: ...nfavorable and nonfunctional conformation</scene> after soman aging to ''Tc''AChE ([[2wg1]]) <ref name...
3. Image:Pdb1kvl chain b.pdb (54 bytes)
   1: Chain B protein, ligand and waters from PDB entry 1KVL
4. Image:Pdb1kvl chain A.pdb (54 bytes)
   1: Chain B protein, ligand and waters from PDB entry 1KVL
5. Image:Pdb1kvl chain B.pdb (53 bytes)
   1: Chain B protein, ligand and water from PDB entry 1KVL
6. Hemoglobin (21,535 bytes)
   12: ...g interactions between the subunits. In the high-affinity R-state conformation the interactions which...
   18: ..., the proximal histidine (the tightest protein Fe ligand) is often called <scene name='32/32/Hisf9/1'>His ...
   20: ...ws a subunit in the all-unliganded versus the all-liganded states of Hb; when oxygen binds to just one sub...
   31: ...e-pocket differences, but the differences between affinities in the R vs T quaternary states are much ...
   35: ...rictive process also increases the specificity of ligand binding.
7. 1zk8 (2,708 bytes)
   7: ... class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
8. 1zkd (2,724 bytes)
   7: ... class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
9. Acetylcholine (3,078 bytes)
   14: ...en.wikipedia.org/wiki/Ligand ligand] recognition. After this binding acetylcholinesterase <scene name=...
10. NADH quinone oxidoreductase (NQO1) with inhibitor dicoumarol (8,927 bytes)
    10: ...lime</b></font>. NQO1 residues, participating in ligand interactions, are shown as stick representation a...
    14: ...b></font> dimer ([[1d4a]], residues important for ligand interactions are <font color='blue'><b>colored bl...
    15: ... and our previous analysis of NQO1 mutations that affect NQO1 interactions we propose that the specifi...
    24: ... and our previous analysis of NQO1 mutations that affect NQO1 interactions we propose that the specifi...
11. Streptomyces griseus Aminopeptidase (SGAP) (9,198 bytes)
    15: ...as ligands for the second ion. Asp97 is a common ligand to both ions. What appears to be a phosphate ani...
    28: ...onsiderable heat stablity (up to 80℃) and was unaffected by 9M urea. The activity, was, however, ve...
12. 117e (5,307 bytes)
    7: ...N:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
    22: <div style="background-color:#fffaf0;">
    24: ...tional studies measuring catalytic efficiency and ligand (metal ion, PPi and Pi) binding, provide strong e...
    30: ..."pdbe-citations 117e" style="background-color:#fffaf0;"></div>
13. 1dan (4,927 bytes)
    7: ...gand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene></td></tr>
14. 8gpb (5,927 bytes)
    6: ...OSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene></td></tr>
    22: <div style="background-color:#fffaf0;">
    24: ...nds to R state GPb with at least 100-fold greater affinity and exhibits four additional hydrogen bonds...
    30: ..."pdbe-citations 8gpb" style="background-color:#fffaf0;"></div>
15. 2src (9,009 bytes)
    7: ...CID-ADENYLATE+ESTER'>ANP</scene>, <scene name='pdbligand=PTR:O-PHOSPHOTYROSINE'>PTR</scene></td></tr>
    13: ...lation of AFAP1 allows the SRC SH2 domain to bind AFAP1 and to localize to actin filaments. Cytoskelet...
    24: <div style="background-color:#fffaf0;">
    26: ... of the regulatory domains, induced by SH2 or SH3 ligands, or by dephosphorylation of Tyr-527, could lead ...
    32: ..."pdbe-citations 2src" style="background-color:#fffaf0;"></div>
16. Scene authoring tools (23,035 bytes)
    47: ...de water, include or exclude other hetero groups (ligands), load a specified biomolecule (biological unit)...
    53: ...n of the first couple of lines of the file shows, after the keyword "documentBase", that it originated...
    61: ...uickly correct mistakes, or to compare before and after changing the scene.
    88: ... residues (or more generally "groups", i.e entire ligand, or building block of nucleic acids and carbohydr...
    91: ...ne of them, or selecting an entire group("residue/ligand") or an entire chain by clicking on one atom in i...
17. 1m85 (2,936 bytes)
    7: ...T:S-DIOXYMETHIONINE'>OMT</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
18. 100d (3,251 bytes)
    7: ... class="sblockDat" id="ligandDat"><scene name='pdbligand=SPM:SPERMINE'>SPM</scene></td></tr>
    10: <div style="background-color:#fffaf0;">
    18: ..."pdbe-citations 100d" style="background-color:#fffaf0;"></div>
19. 101d (3,338 bytes)
    7: ...and=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NT:NETROPSIN'>NT</scene></td></tr>
    10: <div style="background-color:#fffaf0;">
    18: ..."pdbe-citations 101d" style="background-color:#fffaf0;"></div>
20. 101m (2,671 bytes)
    7: ...:N-BUTYL+ISOCYANIDE'>NBN</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>

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