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Article title matches
- Category:Alanine racemase (47 bytes)
1: List of pages with the keyword Alanine racemase - Category:N-acetylmuramoyl-L-alanine amidase (65 bytes)
1: List of pages with the keyword N-acetylmuramoyl-L-alanine amidase - D-alanine-D-alanine ligase (1,106 bytes)
1: ... ADP (stick model), sulfate and Mg+2 ion (green) (PDB entry [[2i8c]])' scene='55/552270/Cv/1'>
4: ...bacterial peptidoglycan synthesis pathway and the alanine metabolism.<ref>PMID:7939684</ref>
14: ==3D structures of D-alanine-D-alanine ligase==
15: [[D-alanine-D-alanine ligase 3D structures]] - Category:D-alanine (40 bytes)
1: List of pages with the keyword D-alanine - Category:Alanine (38 bytes)
1: List of pages with the keyword Alanine - Category:Alanine phosphonate (50 bytes)
1: List of pages with the keyword Alanine phosphonate - Category:UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase (81 bytes)
1: ... of pages with the keyword UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase - Category:D-alanine--D-alanine ligase (58 bytes)
1: List of pages with the keyword D-alanine--D-alanine ligase - Category:Alanine scanning (47 bytes)
1: List of pages with the keyword Alanine scanning - Category:D-alanine phosphonate (52 bytes)
1: List of pages with the keyword D-alanine phosphonate - Category:UDP-N-acetylmuramate--L-alanine ligase (69 bytes)
1: ...of pages with the keyword UDP-N-acetylmuramate--L-alanine ligase - Category:Alanine--glyoxylate transaminase (63 bytes)
1: List of pages with the keyword Alanine--glyoxylate transaminase - Category:Pantoate--beta-alanine ligase (60 bytes)
1: List of pages with the keyword Pantoate--beta-alanine ligase - Category:Udp-n-acetylmuramate-alanine ligase murc (71 bytes)
1: ...st of pages with the keyword Udp-n-acetylmuramate-alanine ligase murc - Category:Alanine-zipper (45 bytes)
1: List of pages with the keyword Alanine-zipper - Category:Beta alanine (43 bytes)
1: List of pages with the keyword Beta alanine - Category:Alanine dehydrogenase (52 bytes)
1: List of pages with the keyword Alanine dehydrogenase - Category:Alanine--tRNA ligase (51 bytes)
1: List of pages with the keyword Alanine--tRNA ligase - Category:Poly-alanine mutation (52 bytes)
1: List of pages with the keyword Poly-alanine mutation - Category:Poly-alanine (43 bytes)
1: List of pages with the keyword Poly-alanine
Page text matches
- Peptide (2,365 bytes)
6: ...'Peptide/Emartz_view3/6'>Ala-Ala-Ala</scene> (tri-alanine). Adding a carbon chain plus an NH3 on the first... - 1e4e (4,596 bytes)
5: ...doi.org/10.2210/rcsb_pdb/mom_2015_12 10.2210/rcsb_pdb/mom_2015_12]. Full crystallographic information i...
7: ...PHORYL-PHOSPHINIC+ACID'>PHY</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
8: ...Bsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1e4e ProSAT]</span></td></tr>
11: ...ces a peptidoglycan which does not terminate in D-alanine but in D-lactate, thus preventing vancomycin or t...
20: ...://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1e4e ConSurf]. - 2cns (4,395 bytes)
7: ...ACO:ACETYL+COENZYME+*A'>ACO</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
8: ...Bsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cns ProSAT]</span></td></tr>
11: .../RIMI_SALTY RIMI_SALTY] Acetylates the N-terminal alanine of ribosomal protein S18.[HAMAP-Rule:MF_02210]<re...
20: ...://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cns ConSurf].
30: <div class="pdbe-citations 2cns" style="background-color:#fffaf0;... - 2cnt (4,435 bytes)
7: ...pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
8: ...Bsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cnt ProSAT]</span></td></tr>
11: .../RIMI_SALTY RIMI_SALTY] Acetylates the N-terminal alanine of ribosomal protein S18.[HAMAP-Rule:MF_02210]<re...
20: ...://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cnt ConSurf].
30: <div class="pdbe-citations 2cnt" style="background-color:#fffaf0;... - 2cnm (4,455 bytes)
7: ...igand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=COA:COENZYME+A'>COA</scene></td></tr>
8: ...Bsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cnm ProSAT]</span></td></tr>
11: .../RIMI_SALTY RIMI_SALTY] Acetylates the N-terminal alanine of ribosomal protein bS18.[HAMAP-Rule:MF_02210]<r...
20: ...://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cnm ConSurf].
30: <div class="pdbe-citations 2cnm" style="background-color:#fffaf0;... - 1wcb (4,834 bytes)
7: ...bligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=PE1:N~2~-({3-HYDROXY-2-METHYL-5-[(PHOSPHONO...
8: ...Bsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wcb ProSAT]</span></td></tr>
18: ...://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1wcb ConSurf].
22: ...any residue capable of deprotonating C alpha of L-alanine, Tyr-H100b thus underlies the enantiomeric select...
28: <div class="pdbe-citations 1wcb" style="background-color:#fffaf0;... - 1wc7 (2,485 bytes)
2: ... ANTIBODY 15A9 IN COMPLEX WITH PHOSPHOPYRIDOXYL-L-ALANINE==
7: ...bligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=PP3:ALANYL-PYRIDOXAL-5-PHOSPHATE'>PP3</scen...
8: ...Bsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wc7 ProSAT]</span></td></tr>
18: ...://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1wc7 ConSurf]. - 1cwi (3,893 bytes)
2: ...CYCLOPHILIN A COMPLEXED WITH 2-VAL 3-(N-METHYL)-D-ALANINE CYCLOSPORIN==
7: ...nd=MLE:N-METHYLLEUCINE'>MLE</scene>, <scene name='pdbligand=MVA:N-METHYLVALINE'>MVA</scene></td></tr>
8: ...Bsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1cwi ProSAT]</span></td></tr>
20: ...://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1cwi ConSurf].
30: <div class="pdbe-citations 1cwi" style="background-color:#fffaf0;... - 4hov (3,552 bytes)
7: ...HYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
8: ...Bsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4hov ProSAT]</span></td></tr>
14: ...bstitution of Asn246, a distal heme residue, with alanine increased the enzyme's apparent k(cat) and k(cat)...
20: <div class="pdbe-citations 4hov" style="background-color:#fffaf0;... - 2cf5 (5,553 bytes)
7: ...<td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
8: ...Bsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cf5 ProSAT]</span></td></tr>
20: ...://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cf5 ConSurf].
24: ...ing AtCAD5, site-directed mutagenesis of Glu70 to alanine resulted in loss of catalytic activity, thereby i...
30: <div class="pdbe-citations 2cf5" style="background-color:#fffaf0;... - 2cf6 (5,570 bytes)
7: ...DINUCLEOTIDE+PHOSPHATE'>NAP</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
8: ...Bsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cf6 ProSAT]</span></td></tr>
20: ...://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cf6 ConSurf].
24: ...ing AtCAD5, site-directed mutagenesis of Glu70 to alanine resulted in loss of catalytic activity, thereby i...
30: <div class="pdbe-citations 2cf6" style="background-color:#fffaf0;... - 1aw8 (4,036 bytes)
7: ...<td class="sblockDat" id="ligandDat"><scene name='pdbligand=PYR:PYRUVIC+ACID'>PYR</scene></td></tr>
8: ...Bsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1aw8 ProSAT]</span></td></tr>
11: ...dent decarboxylation of aspartate to produce beta-alanine.<ref>PMID:6767707</ref>
20: ...://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1aw8 ConSurf].
30: <div class="pdbe-citations 1aw8" style="background-color:#fffaf0;... - 1av5 (4,024 bytes)
7: ...igand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=AP2:PHOSPHOMETHYLPHOSPHONIC+ACID+ADENOSYL+E...
8: ...Bsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1av5 ProSAT]</span></td></tr>
11: ...midate substrates such as AMP-morpholidate, AMP-N-alanine methyl ester, AMP-alpha-acetyl lysine methyl este...
20: ...://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1av5 ConSurf].
30: <div class="pdbe-citations 1av5" style="background-color:#fffaf0;... - 2c7a (4,958 bytes)
7: ...<td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
8: ...Bsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2c7a ProSAT]</span></td></tr>
20: ...://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2c7a ConSurf].
24: ...of the CTE to the minor groove flanking the HREs. Alanine substitutions of the interacting CTE residues red...
30: <div class="pdbe-citations 2c7a" style="background-color:#fffaf0;... - 4jid (3,636 bytes)
7: ...<td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
8: ...Bsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4jid ProSAT]</span></td></tr>
14: ...zed DD-carboxypeptidases hydrolyze the terminal D-alanine from the stem pentapeptide to produce a tetrapept...
20: <div class="pdbe-citations 4jid" style="background-color:#fffaf0;... - 2uwh (6,905 bytes)
7: ...HYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=PLM:PALMITIC+ACID'>PLM</scene></td></tr>
8: ...Bsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2uwh ProSAT]</span></td></tr>
20: ...://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2uwh ConSurf].
24: ... alanine at position 82. The mutants having phenylalanine or tryptophan at this position have very much (ap...
30: <div class="pdbe-citations 2uwh" style="background-color:#fffaf0;... - 1uwz (4,862 bytes)
7: ...TETRAHYDRODEOXYURIDINE'>THU</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
8: ...Bsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1uwz ProSAT]</span></td></tr>
20: ...://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1uwz ConSurf].
24: ...ne (R56Q), the corresponding residue in D-CDA, an alanine (R56A), and an aspartate (R56D). Moreover, one of...
30: <div class="pdbe-citations 1uwz" style="background-color:#fffaf0;... - 1iow (4,185 bytes)
7: ...ligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PHY:1(S)-AMINOETHYL-(2-CARBOXYPROPYL)PHOSPH...
8: ...Bsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1iow ProSAT]</span></td></tr>
20: ...://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1iow ConSurf].
24: The crystallographic structure of the D-alanine:D-alanine ligase of the ddlB gene of Escherichia coli compl...
26: D-alanine:D-alanine ligase: phosphonate and phosphinate intermediates... - 1iov (4,177 bytes)
7: ...ligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=POB:2-[(1-AMINO-ETHYL)-PHOSPHATE-PHOSPHINOY...
8: ...Bsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1iov ProSAT]</span></td></tr>
20: ...://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1iov ConSurf].
24: The crystallographic structure of the D-alanine:D-alanine ligase of the ddlB gene of Escherichia coli compl...
26: D-alanine:D-alanine ligase: phosphonate and phosphinate intermediates... - 2bwt (4,635 bytes)
7: ...d=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</sce...
8: ...Bsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2bwt ProSAT]</span></td></tr>
20: ...://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2bwt ConSurf].
24: ...proline residue is replaced by N-methylalanine or alanine are cleaved by APPro, but they are extremely poor...
30: <div class="pdbe-citations 2bwt" style="background-color:#fffaf0;...
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