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- Category:Blank, I D (41 bytes)
1: List of pages with the keyword Blank, I D - Category:Blank, K (39 bytes)
1: List of pages with the keyword Blank, K - Image:Blank-white-30x460px.png (0 bytes)
- Category:Blank, P N (41 bytes)
1: List of pages with the keyword Blank, P N - Category:Blank PN (39 bytes)
1: List of pages with the keyword Blank PN - Category:Blank K (38 bytes)
1: List of pages with the keyword Blank K - Category:Blank ID (39 bytes)
1: List of pages with the keyword Blank ID - User:Jaime Prilusky/Test/Blank (230 bytes)
1: ...ion load='' size='340' side='right' caption='' scene=''>
4: <jmolButton>
5: <text>Open console</text>
6: <script>console on;</script>
7: </jmolButton>
Page text matches
- Help:Editing (24,612 bytes)
1: ...enter><table style='background:#ffd8d8;' cellpadding='6'><tr><td>
2: ...roteopedia:Video Guide|Video Guides]], and the main [[Help]] Page.
3: </td></tr></table></center>
5: ==<big>Help with Wikitext Syntax</big>==
6: ...e complete help reference dealing with wikitext, and Proteopedia uses the same wiki software. - Scene authoring tools (23,035 bytes)
1: ...roductory videos, e.g. [https://youtu.be/P-LsB2U8rNM].
3: ==Where are the ''Scene authoring tools''?==
6: ...cludes these tags, but this page for example does not.
11: ...Insert caption here' scene='Insert optional scene name here' />
12: ...eo tutorial can be viewed here: http://www.weizmann.ac.il/ISPC/Proteopedia.html. - 4gex (3,472 bytes)
2: ==Structure of a stabilised ceSAS-6 dimer, second crystal form==
3: ...4gex]], [[Resolution|resolution]] 2.80Å' scene=''>
5: ...ps://proteopedia.org/fgij/fg.htm?mol=4GEX FirstGlance]. <br>
6: ...thodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8Å</td></tr>
7: ..."><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> - 1ktr (4,589 bytes)
2: ...ain Fragment (scFv) in Complex with a Oligohistidine peptide==
3: ...1ktr]], [[Resolution|resolution]] 2.70Å' scene=''>
5: ...ps://proteopedia.org/fgij/fg.htm?mol=1KTR FirstGlance]. <br>
6: ...thodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7Å</td></tr>
7: ...its.org/prosat/prosatexe?pdbcode=1ktr ProSAT]</span></td></tr> - 8f1g (4,008 bytes)
2: ...tal structure of human WDR5 in complex with compound WM662==
3: ...8f1g]], [[Resolution|resolution]] 2.14Å' scene=''>
5: ...ps://proteopedia.org/fgij/fg.htm?mol=8F1G FirstGlance]. <br>
6: ...thodDat">X-ray diffraction, [[Resolution|Resolution]] 2.14Å</td></tr>
7: ...-yl)amino]propan-2-yl}oxy)propanoic+acid'>X8N</scene></td></tr> - Proteopedia:Problems (18,636 bytes)
1: ...of Proteopedia. Please list desired new features on the page [[Proteopedia:Wishlist]]
3: ...d when. Also please add a note giving the date when it was fixed/solved.
5: ==Problems, more urgent==
7: ...IST) Page for [[1au1]] was reseeded. The correction will gradually propagate to other pages.
9: ... related problem to the latest PDB file remediation. Solved for these structures but there might be o... - Site (3,799 bytes)
1: ...n, Evolutionary#Locating_Variable_Patches|evolutionarily hypervariable]].
3: ==Sites Green Links==
4: ...he Clicking on the green links displays the full name of the site immediately below the molecule.
6: ==Identifying Residues in Sites==
7: ...in front of it, and has only blank background behind it. - User:Eric Martz/Sandbox 2 (1,499 bytes)
1: <!--{{STRUCTURE_2hhd | PDB=2hhd | SCENE= }}-->
2: ...2hhd' size='350' frame='true' align='right' caption='2hhd' />
6: ...he same version that was in use in Proteopedia when this page was created.
8: ..._Martz/Test_state_script/2'>Here is the scene</scene>
9: ... in the script and executed it, then saved the scene.) - 4g79 (3,507 bytes)
2: ==Structure a C. elegans SAS-6 variant==
3: ...4g79]], [[Resolution|resolution]] 1.80Å' scene=''>
5: ...ps://proteopedia.org/fgij/fg.htm?mol=4G79 FirstGlance]. <br>
6: ...thodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr>
7: ...name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr> - Lac repressor (19,557 bytes)
1: __NOTOC__
2: ...ight' scene='Morphs/1osl_19_1l1m_9_morph/2' caption=''>
3: ...orph]] of the '''lac repressor''' complexed with DNA
5: ...teractive model: {{Template:Button Toggle Animation2}}
6: ...a pre-existing kink, is unknown. [[#Specific Binding| Details Below]]. - User:Wayne Decatur/Sandbox (3,810 bytes)
1: ...rue' align='right' caption='p19 complexed with siRNA' />
2: ...tion of the two strands of this silencing RNA (siRNA):<br>
3: <small><b><font face = 'courier'>
4: ...>5'-pCGUACGCGUCACGCGUACGUU-OH-3'</font><br>
5: |||||||||||||||||||<br> - Molecular Playground/Authoring (19,935 bytes)
1: ... [http://molecularplayground.org MolecularPlayground.Org]).
3: ==Components of a Module for MP==
5: ...e in MP will ideally include the following components:
7: <li> A '''[[#Jmol Scripting Options|Jmol script]]''' that
10: ...molecule''', optionally with animations, labels, and color keys. - User:Mary Ball/Scenes (19,495 bytes)
1: {{STRUCTURE_1acj| PDB=1acj | SCENE= }}
6: ...d with [http://en.wikipedia.org/wiki/Tacrine tacrine].
8: ...acj/Active_site_of_1acj/2'>AChE's active site</scene>.
10: ...or more information on creating and using scenes in Proteopedia pages, see the rest of this Tutorial.
15: ===What are scenes?=== - Help:Quiz (7,270 bytes)
1: Quizzes can be created in Proteopedia.
3: Questions can be:
6: ... is possible; choices can be text or images or sounds)
7: ...ple answers can be correct; optionally not CaSe sensitive)
8: ...swer (exact number, or optional range, or % tolerance) - 3mg0 (4,638 bytes)
3: ...3mg0]], [[Resolution|resolution]] 2.68Å' scene=''>
5: ...ps://proteopedia.org/fgij/fg.htm?mol=3MG0 FirstGlance]. <br>
6: ...thodDat">X-ray diffraction, [[Resolution|Resolution]] 2.68Å</td></tr>
7: ...YRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE'>BO2</scene></td></tr>
8: ...its.org/prosat/prosatexe?pdbcode=3mg0 ProSAT]</span></td></tr> - 3mg4 (4,803 bytes)
2: ==Structure of yeast 20S proteasome with Compound 1==
3: ...3mg4]], [[Resolution|resolution]] 3.11Å' scene=''>
5: ...ps://proteopedia.org/fgij/fg.htm?mol=3MG4 FirstGlance]. <br>
6: ...thodDat">X-ray diffraction, [[Resolution|Resolution]] 3.11Å</td></tr>
7: ..., <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> - 3mg6 (4,823 bytes)
2: ...ture of yeast 20S open-gate proteasome with Compound 6==
3: ...3mg6]], [[Resolution|resolution]] 2.60Å' scene=''>
5: ...ps://proteopedia.org/fgij/fg.htm?mol=3MG6 FirstGlance]. <br>
6: ...thodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6Å</td></tr>
7: ..., <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> - 3mg7 (4,808 bytes)
2: ...ture of yeast 20S open-gate proteasome with Compound 8==
3: ...3mg7]], [[Resolution|resolution]] 2.78Å' scene=''>
5: ...ps://proteopedia.org/fgij/fg.htm?mol=3MG7 FirstGlance]. <br>
6: ...thodDat">X-ray diffraction, [[Resolution|Resolution]] 2.78Å</td></tr>
7: ..., <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> - 3mg8 (4,810 bytes)
2: ...ture of yeast 20S open-gate proteasome with Compound 16==
3: ...3mg8]], [[Resolution|resolution]] 2.59Å' scene=''>
5: ...ps://proteopedia.org/fgij/fg.htm?mol=3MG8 FirstGlance]. <br>
6: ...thodDat">X-ray diffraction, [[Resolution|Resolution]] 2.59Å</td></tr>
7: ..., <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> - User:Jaime Prilusky/Links (7,849 bytes)
1: {{#tree:id=PDBTree|openlevels=0|close=top|open=top|
3: [[User:Jaime_Prilusky/JmolExtension/Extensionv6]]
5: [[Believe_It_or_Not!]]
8: ...uctural_Proteomics_and_its_Impact_on_the_Life_Sciences:6|Book:6]]
9: ***[[User:Jaime_Prilusky/Sentences]]
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