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- User:Karsten Theis/DNA bulges (2,741 bytes)
1: '''DNA bulges''' are features in double stranded DNA that occur...
7: ==Bulges in 3D==
21: == Modelling bulges ==
Page text matches
- 1clx (4,270 bytes)
24: ...se catalytic glutamate residues are found on beta-bulges. An atypically long loop after strand 7 is stabil... - 2a9l (2,369 bytes)
11: ...and by a network of backbone hydrogen bonds. Both bulges are presented on the same minor groove face of th... - 1a9l (2,478 bytes)
11: ...and by a network of backbone hydrogen bonds. Both bulges are presented on the same minor groove face of th... - 1y99 (3,673 bytes)
12: ...e the observed extrahelical conformation of these bulges.
14: ...1 RNA reveals an extended duplex with two adenine bulges.,Ennifar E, Yusupov M, Walter P, Marquet R, Ehres... - 2bsr (14,517 bytes)
25: ...exposed whilst in the HIV decamer, the main-chain bulges into the solvent around P7. Thus, HLA-B*2705 pres... - 2bss (14,613 bytes)
25: ...exposed whilst in the HIV decamer, the main-chain bulges into the solvent around P7. Thus, HLA-B*2705 pres... - 2bst (14,581 bytes)
25: ...exposed whilst in the HIV decamer, the main-chain bulges into the solvent around P7. Thus, HLA-B*2705 pres... - 2gm0 (3,811 bytes)
11: ...are the least stable parts of the molecule. The G-bulges display high conformational variability in the re... - 462d (3,714 bytes)
12: ...e the observed extrahelical conformation of these bulges.
14: ...1 RNA reveals an extended duplex with two adenine bulges.,Ennifar E, Yusupov M, Walter P, Marquet R, Ehres... - 1mzd (4,305 bytes)
23: ...rmally provides a template for substrate binding, bulges out of the active site and is distorted. With ana... - 1qsv (7,507 bytes)
25: ...tures including a region near the N terminus that bulges away from the domain rather than pairing with the... - 1qsz (7,503 bytes)
25: ...tures including a region near the N terminus that bulges away from the domain rather than pairing with the... - 1xh3 (14,194 bytes)
25: ... length. The central part of the 14-meric peptide bulges flexibly out of the groove. Two variants of the a... - 1brd (5,553 bytes)
24: ...side-chains as guide points and taking account of bulges in the helices that indicate smaller side-chains ... - 1buq (5,748 bytes)
24: ...ces, eight beta-strands, four turns, and two beta-bulges. The beta-strands form a mixed beta-sheet. One of... - 1cfb (4,558 bytes)
24: ...ar matrix proteins tenascin and fibronectin. beta bulges and left-handed polyproline II helices disrupt th... - 1hbw (3,741 bytes)
13: ... loops between the three coiled coils form mobile bulges causing a variation of twist angles between the h... - 1hxv (4,194 bytes)
23: ...d to FKBP exist in the flap region and within the bulges of strand 5 of the beta sheet. Although the activ... - 1t4n (4,595 bytes)
23: ...2-14 base pairs interrupted by internal loops and bulges and capped by conserved AGNN tetraloops. Consiste... - 1t4o (4,683 bytes)
23: ...2-14 base pairs interrupted by internal loops and bulges and capped by conserved AGNN tetraloops. Consiste...
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