Search results
From Proteopedia
You searched for CzrA+DNA.pdb
There is no page with the exact title "CzrA+DNA.pdb". The search results for "CzrA+DNA.pdb" are displayed below. You can create a page titled CzrA+DNA.pdb (by clicking on the red link).
For more information about searching Proteopedia, see Help.
Showing below up to 20 results starting with #1.
View (previous 20) (next 20) (20 | 50 | 100 | 250 | 500)
Article title matches
- Category:Czra (35 bytes)
1: List of pages with the keyword Czra - CzrA (9,960 bytes)
1: <StructureSection load='CzrAwithDNA.pdb' size='340' frame='true' side='right' caption='Th...
2: <scene name='69/694220/Czra_with_dna/1'>CzrA</scene> is a transcriptional repressor protein re...
5: ...regulator protein to decrease its ability to bind DNA and repress transcription.
6: ...eron.png|500px|thumb|center|Figure 1: Overview of CzrA operon structure]]
8: ...) operon acts as described above (Figure 1), with CzrA acting as a regulator protein to the downstream s... - Image:CzrA+DNA.pdb (314 bytes)
1: ...ations of Allosteric Motions in Zn Sensor Protein CzrA; J Am Chem Soc. 2012 134(7):3367-76. - CzrA 3D structures (333 bytes)
1: == 3D Structures of CzrA ==
5: [[1r1u]] – SaCzrA – ''Staphylococcus aureus'' <br />
6: [[1r1v]] – SaCzrA + Zn<br />
7: [[2kjb]], [[2kjc]] – SaCzrA - NMR<br />
8: [[2m30]] – SaCzrA + Zn - NMR<br />
Page text matches
- 1r1t (4,492 bytes)
7: ...Bsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1r1t ProSAT]</span></td></tr>
10: ...ne. Binds two zinc ions per dimer. The complex of DNA and SmtB is dissociated by zinc ions.<ref>PMID:12...
19: ...://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1r1t ConSurf].
23: ... in the conformation and dynamics of the putative DNA-binding helices.
29: <div class="pdbe-citations 1r1t" style="background-color:#fffaf0;... - 1r23 (4,676 bytes)
7: ...<td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
8: ...Bsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1r23 ProSAT]</span></td></tr>
11: ...ne. Binds two zinc ions per dimer. The complex of DNA and SmtB is dissociated by zinc ions.<ref>PMID:12...
20: ...://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1r23 ConSurf].
24: ... in the conformation and dynamics of the putative DNA-binding helices. - 1r1u (4,228 bytes)
2: ...re of the metal-sensing transcriptional repressor CzrA from Staphylococcus aureus in the apo-form==
7: ...Bsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1r1u ProSAT]</span></td></tr>
19: ...://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1r1u ConSurf].
23: ... in the conformation and dynamics of the putative DNA-binding helices.
29: <div class="pdbe-citations 1r1u" style="background-color:#fffaf0;... - 1r1v (4,393 bytes)
2: ...re of the metal-sensing transcriptional repressor CzrA from Staphylococcus aureus in the Zn2-form==
7: ...<td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
8: ...Bsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1r1v ProSAT]</span></td></tr>
20: ...://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1r1v ConSurf].
24: ... in the conformation and dynamics of the putative DNA-binding helices. - 4ggg (1,920 bytes)
2: ==Crystal structure of V66A/L68V CzrA in the Zn(II)bound state.==
7: ...bligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
8: ...Bsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ggg ProSAT]</span></td></tr> - 2kjb (4,198 bytes)
2: ==Solution structure of CzrA in the DNA bound state==
7: ...Bsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kjb ProSAT]</span></td></tr>
19: ...://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2kjb ConSurf].
23: ...abilizing the native state ensemble. In contrast, DNA binding significantly enhances protein motions in...
25: ...ture of a paradigm ArsR family zinc sensor in the DNA-bound state.,Arunkumar AI, Campanello GC, Giedroc... - 2kjc (4,195 bytes)
2: ==Solution structure of CzrA in the Zn(II) state==
7: ...Bsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kjc ProSAT]</span></td></tr>
19: ...://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2kjc ConSurf].
23: ...abilizing the native state ensemble. In contrast, DNA binding significantly enhances protein motions in...
25: ...ture of a paradigm ArsR family zinc sensor in the DNA-bound state.,Arunkumar AI, Campanello GC, Giedroc... - Category:Czra (35 bytes)
1: List of pages with the keyword Czra - 2lkp (3,777 bytes)
7: ...Bsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2lkp ProSAT]</span></td></tr>
13: ... likely contributes to the negative regulation of DNA binding by Ni(II). Molecular dynamics simulations...
19: <div class="pdbe-citations 2lkp" style="background-color:#fffaf0;... - Sandbox Reserved 1051 (10,991 bytes)
2: ==CzrA==
3: ...'2KJB' size='340' side='right' caption='The dimer CzrA' scene=''>
6: ...ecreases the proteins affinity or ability to bind DNA. The Chromosome Determined Zinc Responsible (Czr)...
12: ...2+</sup> ions and has relatively low affinity for DNA.
13: ===DNA Binding === - Sandbox Reserved 1052 (11,332 bytes)
1: ...'true' align='left' caption='3D Representation of CzrA with Zn Bound' scene='Insert optional scene name ...
3: ...ecreases the proteins affinity or ability to bind DNA. The Chromosome Determined Zinc Responsible (Czr)...
9: <Structure load='CzrAwithDNA.pdb' size='350' frame='true' align='right' caption='I...
14: paradigm ArsR family zinc sensor in the DNA-bound state. PNAS 106:43
15: ...2+</sup> ions and has relatively low affinity for DNA. - Sandbox Reserved 1053 (9,975 bytes)
1: ...dent Transcriptional Repressor of the Czr operon (CzrA)=
2: <StructureSection load='CzrAwithDNA.pdb' size='340' frame='true' side='right' caption='Th...
3: <scene name='69/694220/Czra_with_dna/1'>CzrA</scene> is a transcriptional repressor protein re...
6: ...regulator protein to decrease its ability to bind DNA and repress transcription.
7: ...eron.png|500px|thumb|center|Figure 1: Overview of CzrA operon structure]] - User:Mary Liggett/Sandbox 1 (1,272 bytes)
1: =='''CzrA in Staphylococcus Aureus'''==
2: ===''CzrA Mechanism''===
3: ===''CzrA with Zn Bound''===
6: ...'true' align='left' caption='3D Representation of CzrA with Zn Bound' scene='Insert optional scene name ...
8: ...ophobic_residues/1'>Hydrophic Residues</scene> of CzrA. - Image:2KJC residues involved in Zn binding.png (49 bytes)
1: Specific residues highlighting Zn binding in CzrA - Image:4GGG bio r 500.jpg (26 bytes)
1: CzrA in the Zn bound state - Image:2kjc.png (113 bytes)
1: Solution Structure of CzrA in the Zinc binding conformation, though Zinc ato... - User:Jakob Jozwiakowski/Sandbox 1 (11,097 bytes)
2: ==CzrA==
3: ...'2KJB' size='340' side='right' caption='The dimer CzrA' scene=''>
6: ...ecreases the proteins affinity or ability to bind DNA. The Chromosome Determined Zinc Responsible (Czr)...
13: paradigm ArsR family zinc sensor in the DNA-bound state. PNAS 106:43
14: ...2+</sup> ions and has relatively low affinity for DNA. - CzrA (9,960 bytes)
1: <StructureSection load='CzrAwithDNA.pdb' size='340' frame='true' side='right' caption='Th...
2: <scene name='69/694220/Czra_with_dna/1'>CzrA</scene> is a transcriptional repressor protein re...
5: ...regulator protein to decrease its ability to bind DNA and repress transcription.
6: ...eron.png|500px|thumb|center|Figure 1: Overview of CzrA operon structure]]
8: ...) operon acts as described above (Figure 1), with CzrA acting as a regulator protein to the downstream s... - Image:CzrA+DNA.pdb (314 bytes)
1: ...ations of Allosteric Motions in Zn Sensor Protein CzrA; J Am Chem Soc. 2012 134(7):3367-76. - Image:CzrAwithDNA.pdb (173 bytes)
2: model of CzrA protein bound to DNA built from coordinates published in the supplemen...
View (previous 20) (next 20) (20 | 50 | 100 | 250 | 500)
