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Image:2QRU(green)2LPR(yellow).png (48 bytes)
1: 2QRU active site alignment with 2LPR. RMSD: 1.17
Image:2QRU(green)2YH2D(orange)DALI.png (54 bytes)
1: Overlap of 2QRU (green) and 2YH2D (orange) using DALI.
Category:Green O (38 bytes)
1: List of pages with the keyword Green O
Category:Green, S.R (41 bytes)
1: List of pages with the keyword Green, S.R
Category:Green JR (39 bytes)
1: List of pages with the keyword Green JR
Category:Green turtle egg white ribonuclease (66 bytes)
1: List of pages with the keyword Green turtle egg white ribonuclease
Category:Green NC (39 bytes)
1: List of pages with the keyword Green NC
Category:Green J (38 bytes)
1: List of pages with the keyword Green J
Category:Tobacco mild green mosaic virus (62 bytes)
1: List of pages with the keyword Tobacco mild green mosaic virus
Category:Green RM (39 bytes)
1: List of pages with the keyword Green RM
Category:Blue/green light-absorbing (57 bytes)
1: List of pages with the keyword Blue/green light-absorbing
Category:Green MJ (39 bytes)
1: List of pages with the keyword Green MJ
Category:Green NM (39 bytes)
1: List of pages with the keyword Green NM
Green Fluorescent Protein (25,332 bytes)
1: ...ein complex with peptide-derived chromophore ([[1ema]])' >
3: ...ous membrane and cytoplasmic proteins, as well as many others.
4: * '''Superfolder GFP''' does not misfold when fused to other proteins.
5: ...hanges the emission when exposed to UV light<ref>PMID:32242924</ref>.
8: ...er], [http://en.wikipedia.org/wiki/Martin_Chalfie Martin Chalfie] and [http://en.wikipedia.org/wiki/R...
Category:Green alga (41 bytes)
1: List of pages with the keyword Green alga
Category:Green fluorescent protein (56 bytes)
1: List of pages with the keyword Green fluorescent protein
Category:Fluorophore green fluorescent protein (68 bytes)
1: List of pages with the keyword Fluorophore green fluorescent protein
Category:Green haem binding protein (57 bytes)
1: List of pages with the keyword Green haem binding protein
Category:Green tea (40 bytes)
1: List of pages with the keyword Green tea
Category:Malachite green (46 bytes)
1: List of pages with the keyword Malachite green

Page text matches

Sandbox Dav 14 (1,103 bytes)
1: ...nd thus observe their existence, location and movement.
5: <applet load='1ema' size='300' frame='true' align='right' caption='GFP' />
8: ...on and oxidation creates the chromophore's five-membered ring via a new bond between the threonine an...
Sandbox dav 4 (1,378 bytes)
1: ...nd thus observe their existence, location and movement.
5: <applet load='1ema' size='300' frame='true' align='center' caption='gfp' />
6: ... acids. The <scene name='Sandbox_dav_4/Gfp/1'>chormophore</scene>
7: ...barrel. The <scene name='Sandbox_dav_4/Gfp/1'>chromophore</scene>
8: ...on and oxidation creates the chromophore's five-membered ring via a new bond between the threonine an...
Help:Editing (24,612 bytes)
2: ...[[Proteopedia:Video Guide|Video Guides]], and the main [[Help]] Page.
6: ...dealing with wikitext, and Proteopedia uses the same wiki software.
10: ... in a [[Help:Sandboxes|Sandbox]] before saving permanent edits on other pages. In fact, a protected S...
13: ...rage, see [[Proteopedia:How to Make a Page|How to Make a Page]]. 
15: ..., you must first decide whether it should be a normal page that any user can edit, or a protected pag...
Hemoglobin (19,234 bytes)
1: ...raphic structure of HbII- oxy [[3P31]]" scene="Hemoglobinits/5" >
3: ... Hemoglobin is an allosteric protein. It is a <jmol>
4: <jmolLink>
7: <text>tetramer</text>
8: </jmolLink>
Ann Taylor/Hemoglobin (7,712 bytes)
1: ...reen and yellow) with bound O2 [[1gzx]]" scene="Hemoglobin/1gzx/2" >
2: ...Hemoglobin/4heme/3'>heme molecules</scene> give hemoglobin its red color.
4: ...y_fe_planarity/3'>into the plane</scene> of the heme.
6: ...these changes, depending on conditions. <jmol><jmolButton>
7: ...0 sansserif;echo Animation Paused; else; anim resume; set echo off;endif;</script>
Help:Contents (6,518 bytes)
2: ... 3D encyclopedia of proteins and other biological molecules. This is the directory of help pages for ...
9: ...ave links to other entries (if you right-click them, the current entry will stay available and the li...
14: ...r them to learn more about them. The [[About Macromolecular Structure]] page is a good place to start...
20: ...w the entry was created or suggestions for improvement.
23: === Becoming a registered user on Proteopedia===
Proteopedia:About (7,060 bytes)
1: <div class="toclimit-2">
5: ...ilities, Types of Contents, and Usage Statistics. More details follow below.
7: ==Proteopedia Mission Statement==
8: ...laborative 3D-encyclopedia of proteins & other biomolecules.'''
11: ...teins, macromolecules, and small molecules and chemicals of interest.
Scene authoring tools (23,035 bytes)
1: ...oductory videos, e.g. [https://youtu.be/P-LsB2U8rNM].
4: [[Image:SAT show.JPG|350px]]
6: ...nt that includes these tags, but this page for example does not.
11: ...sert caption here' scene='Insert optional scene name here' />
12: ...ere: http://www.weizmann.ac.il/ISPC/Proteopedia.html.
1pcs (5,219 bytes)
2: ... TRIPLE MUTANT PLASTOCYANIN FROM THE CYANOBACTERIUM SYNECHOCYSTIS SP. PCC 6803==
5: ...ents use [https://proteopedia.org/fgij/fg.htm?mol=1PCS FirstGlance]. 
6: ...odels|Method:]]</td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resoluti...
7: .../td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene></td></...
8: ...cs RCSB], [https://www.ebi.ac.uk/pdbsum/1pcs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbc...
2jad (5,491 bytes)
5: ...ents use [https://proteopedia.org/fgij/fg.htm?mol=2JAD FirstGlance]. 
6: ...odels|Method:]]</td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resoluti...
7: ...-IMIDAZOL-1-YL]ACETIC+ACID'>PIA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr...
8: ...ad RCSB], [https://www.ebi.ac.uk/pdbsum/2jad PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbc...
11: ...sfer. Fluoresces in vivo upon receiving energy from the Ca(2+)-activated photoprotein aequorin.
1gk2 (3,815 bytes)
2: ...idine Ammonia-Lyase (HAL) Mutant F329G from Pseudomonas putida==
5: ...ents use [https://proteopedia.org/fgij/fg.htm?mol=1GK2 FirstGlance]. 
6: ...odels|Method:]]</td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resoluti...
7: ...me='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr...
8: ...k2 RCSB], [https://www.ebi.ac.uk/pdbsum/1gk2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbc...
1gk8 (4,712 bytes)
2: ==Rubisco from Chlamydomonas reinhardtii==
5: ...ents use [https://proteopedia.org/fgij/fg.htm?mol=1GK8 FirstGlance]. 
6: ...odels|Method:]]</td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resoluti...
7: ...e>, <scene name='pdbligand=SMC:S-METHYLCYSTEINE'>SMC</scene></td></tr>
8: ...k8 RCSB], [https://www.ebi.ac.uk/pdbsum/1gk8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbc...
4hnj (3,793 bytes)
2: ... of BCL-xL domain-swapped dimer in complex with PUMA BH3 peptide at 2.9A resolution==
5: ...ents use [https://proteopedia.org/fgij/fg.htm?mol=4HNJ FirstGlance]. 
6: ...odels|Method:]]</td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resoluti...
7: ...nj RCSB], [https://www.ebi.ac.uk/pdbsum/4hnj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbc...
10: ...promotes apoptosis.<ref>PMID:19917720</ref> <ref>PMID:21840391</ref>
9mza (4,581 bytes)
2: ==Chemically Hijacked BCL6-TCIP3-p300 Complex==
3: ...on load='9mza' size='340' side='right'caption='[[9mza]], [[Resolution|resolution]] 2.10&Aring;' scene...
5: .../b> use [https://proteopedia.org/fgij/fg.htm?mol=9MZA FirstGlance]. 
6: ...odels|Method:]]</td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resoluti...
7: ...,7-tetrahydro-5H-pyrazolo[4,3-c]pyridine-5-carboxamide'>A1BUC</scene></td></tr>
9dc0 (1,526 bytes)
5: ...ents use [https://proteopedia.org/fgij/fg.htm?mol=9DC0 FirstGlance]. 
6: ...odels|Method:]]</td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resoluti...
7: ...c0 RCSB], [https://www.ebi.ac.uk/pdbsum/9dc0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbc...
10: ...ww.uniprot.org/uniprot/A0A142D842_ERIRU A0A142D842_ERIRU]
16: [[Category: Green CB]]
1uw9 (5,558 bytes)
2: ==L290F-A222T chlamydomonas Rubisco mutant==
5: ...ents use [https://proteopedia.org/fgij/fg.htm?mol=1UW9 FirstGlance]. 
6: ...odels|Method:]]</td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resoluti...
7: ...e>, <scene name='pdbligand=SMC:S-METHYLCYSTEINE'>SMC</scene></td></tr>
8: ...w9 RCSB], [https://www.ebi.ac.uk/pdbsum/1uw9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbc...
1uwa (5,556 bytes)
2: ==L290F mutant rubisco from chlamydomonas==
5: ...ents use [https://proteopedia.org/fgij/fg.htm?mol=1UWA FirstGlance]. 
6: ...odels|Method:]]</td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resoluti...
7: ...e>, <scene name='pdbligand=SMC:S-METHYLCYSTEINE'>SMC</scene></td></tr>
8: ...wa RCSB], [https://www.ebi.ac.uk/pdbsum/1uwa PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbc...
2bwd (4,579 bytes)
2: ==Atomic Resolution Structure of Achromobacter cycloclastes Cu Nitrite Reductase with End...
5: ...ents use [https://proteopedia.org/fgij/fg.htm?mol=2BWD FirstGlance]. 
6: ...odels|Method:]]</td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resoluti...
7: ...pdbligand=MLI:MALONATE+ION'>MLI</scene>, <scene name='pdbligand=NO2:NITRITE+ION'>NO2</scene></td></tr...
8: ...wd RCSB], [https://www.ebi.ac.uk/pdbsum/2bwd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbc...
2bw4 (4,506 bytes)
2: ...Resolution Structure of Resting State of the Achromobacter cycloclastes Cu Nitrite Reductase==
5: ...ents use [https://proteopedia.org/fgij/fg.htm?mol=2BW4 FirstGlance]. 
6: ...odels|Method:]]</td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resoluti...
7: ...pdbligand=MLI:MALONATE+ION'>MLI</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr...
8: ...w4 RCSB], [https://www.ebi.ac.uk/pdbsum/2bw4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbc...
2bw5 (4,551 bytes)
2: ==Atomic Resolution Structure of NO-bound Achromobacter cycloclastes Cu Nitrite Reductase==
5: ...ents use [https://proteopedia.org/fgij/fg.htm?mol=2BW5 FirstGlance]. 
6: ...odels|Method:]]</td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resoluti...
7: ...pdbligand=MLI:MALONATE+ION'>MLI</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></...
8: ...w5 RCSB], [https://www.ebi.ac.uk/pdbsum/2bw5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbc...

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