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Article title matches
- Theoretical modeling (32 bytes)
- Category:Molecular modeling (49 bytes)
1: List of pages with the keyword Molecular modeling - Category:Modeling (39 bytes)
1: List of pages with the keyword Modeling - Category:Homology modeling (48 bytes)
1: List of pages with the keyword Homology modeling - Category:Membrane modeling (48 bytes)
1: List of pages with the keyword Membrane modeling - Molecular modeling and visualization software (8,329 bytes)
1: ==Visualization vs. Modeling==
3: ...ting molecular model without changing it, while ''modeling'' software can create the model, or modify it by ...
14: ...onnect.net/ Samson], a powerful visualization and modeling package that is menu-driven. Free for basic use. ...
26: ==Free molecular modeling software==
28: Molecular modeling software usually includes visualization capabilit... - Image:Center for BioMolecular Modeling Logo.jpg (110 bytes)
2: Center for BioMolecular Modeling Logo - User:Wayne Decatur/Homology Modeling (8,425 bytes)
2: **[[Homology model|Homology modeling page]] at Proteopedia
3: ... coli DnaC helicase loader| Eric Martz's Homology modeling of DnaC]]
5: ...htly linked to SWISS-MODEL, an automated homology modeling server developed within the Swiss Institute of Bi...
6: ...cularLevel/Matics/index.html Gale Rhodes Homology modeling tutorial using Swiss PDB Viewer (DeepView)]
7: ...diction by HMM-HMM comparison] - Because homology modeling relies on identifying homologous sequences with k... - Practical Guide to Homology Modeling (26,516 bytes)
1: .../en.wikipedia.org/wiki/Homology_modeling Homology modeling] is well documented, although more technical and ...
10: {{Template:Homology_Modeling_Intro}}
12: == Rationale for homology modeling ==
80: ...be futile. Therefore, before considering homology modeling or crystallization experiments, it is important t...
111: ==Limitations of Homology Modeling== - User:Wayne Decatur/Molecular modeling tools (6,392 bytes)
1: ...ling Platform] - Small Molecule and Macromolecule Modeling and Simulations.
3: ... Python-based interface for Interactive Molecular Modeling.
7: ...BViewer = DeepView]], a powerful and popular free modeling package (not open-source). Has an interface linke...
9: ...lso YASARA Structure features a complete homology modeling module that fully automatically takes all the ste...
15: ...d Side Chain Atomic eneRgy )] performs side-chain modeling based on orientation-dependent energy functions a... - Category:De novo modeling (47 bytes)
1: List of pages with the keyword De novo modeling - Homology modeling servers (8,326 bytes)
3: ...or protein sequences. The performance of homology modeling methods is evaluated in an international, biannua...
12: ...-MODEL] provides a free, fully-automated homology modeling service. Using the ''Automated Mode'', you submit...
16: ...www.ncbi.nlm.nih.gov/pubmed/17640066 The Homology Modeling Automatically (HOMA) web site].
20: ...eality Application) features a complete homology modeling module that fully automatically takes all the ste...
23: MetaServers are servers that submit your modeling job to other servers. - Homology modeling (362 bytes)
1: {{Template:Homology_Modeling_Intro}}
3: ...y model, please see [[Practical Guide to Homology Modeling]].</span>
6: *[[Practical Guide to Homology Modeling]]
7: *[[Homology modeling servers]]
9: .../en.wikipedia.org/wiki/Homology_modeling Homology Modeling in Wikipedia] - Category:Computer modeling (48 bytes)
1: List of pages with the keyword Computer modeling - Category:This is a model obtained by nmr-restrained modeling and minimization (99 bytes)
1: ...eyword This is a model obtained by nmr-restrained modeling and minimization
Page text matches
- Hemoglobin (21,535 bytes)
83: ...of Hemoglobin at The MSOE Center for BioMolecular Modeling== - 1vyo (4,008 bytes)
24: ...lorimetry, UV/visible spectroscopy, and molecular modeling were used to analyze the binding of 15 azo molecu... - 1wcb (4,834 bytes)
22: ...and 2.5A resolution, respectively, and served for modeling the complexes with the corresponding planar imine... - 3pcn (5,094 bytes)
24: ...erobic 3,4-PCD.PCA complex based solely on direct modeling of the 2Fo - Fc electron density and suggests tha... - 8pch (4,913 bytes)
24: ...itioning the mini-chain in the active-site cleft. Modeling of a substrate into the active-site cleft suggest... - 1sp2 (5,358 bytes)
11: ...response to DNA damage. Implicated in chromatin remodeling. Plays a role in the recruitment of SMARCA4/BRG1 ...
24: ...lex is also preserved in unbound Sp1f2 and Sp1f3. Modeling Sp1-DNA complex by overlaying the Sp1f2 and Sp1f3... - 1sp1 (4,610 bytes)
11: ...response to DNA damage. Implicated in chromatin remodeling. Plays a role in the recruitment of SMARCA4/BRG1 ...
14: ...lex is also preserved in unbound Sp1f2 and Sp1f3. Modeling Sp1-DNA complex by overlaying the Sp1f2 and Sp1f3... - 1gww (4,693 bytes)
24: ...e location of these monosaccharides and molecular modeling suggest that binding of a distorted conformation ... - 1gwv (4,810 bytes)
24: ...e location of these monosaccharides and molecular modeling suggest that binding of a distorted conformation ... - 1ha5 (4,631 bytes)
24: ...ass II recognition are explored using a molecular modeling approach. The results indicate that, despite thei... - 1avw (4,676 bytes)
24: ... thus retains a nominal trigonal planar geometry. Modeling studies on the complex between a homologous Kunit... - 1avu (4,352 bytes)
23: ... thus retains a nominal trigonal planar geometry. Modeling studies on the complex between a homologous Kunit... - 1avx (4,673 bytes)
24: ... thus retains a nominal trigonal planar geometry. Modeling studies on the complex between a homologous Kunit... - 2ccr (5,137 bytes)
26: ...-galactanase by crystallography and computational modeling.,Le Nours J, De Maria L, Welner D, Jorgensen CT, ... - 2j6i (4,652 bytes)
24: ...rmed based on physiological studies and structure modeling. However, X-ray structural information has been r... - Research Groups, Institutes & Programs (648 bytes)
7: ...MART:Teams|SMART Teams]], Center for BioMolecular Modeling, Milwaukee School of Engineering, Milwaukee, Wisc... - 1gzc (4,679 bytes)
24: ...ite of the lectin, pointing to limitations of the modeling approach. In addition to the structural character... - 1an1 (4,853 bytes)
24: ...he sidechain of the specificity residue Lys8. Our modeling studies indicate that these interactions are main...
26: ...erived tryptase inhibitor (LDTI) with trypsin and modeling of the LDTI-tryptase system.,Di Marco S, Priestle... - 2j94 (5,654 bytes)
26: ... structures of fXa-ligand complexes and molecular modeling studies. A good correlation between in vitro anti... - 2j95 (5,600 bytes)
26: ... structures of fXa-ligand complexes and molecular modeling studies. A good correlation between in vitro anti...
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