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Article title matches
- Image:Ligand tunnel.png (0 bytes)
- Image:Ligand overlay.pdb (0 bytes)
- Category:Dansyl ligand (44 bytes)
1: List of pages with the keyword Dansyl ligand - Tumor necrosis factor ligand superfamily 3D structures (3,641 bytes)
1: ==3D structures of tumor necrosis factor ligand superfamily==
3: ...iption of the protein see [[Tumor necrosis factor ligand superfamily]]
4: {{#tree:id=OrganizedByTopic|openlevels=0|
6: * Tumor necrosis factor ligand superfamily member 1 (Lymphotoxin-beta)
10: * Tumor necrosis factor ligand superfamily member 2 see [[Tumor necrosis factor]... - Ligand (2,978 bytes)
1: ... substrate or inhibitor ligands. Avidin binds the ligand biotin.
3: ...dia places beneath molecules under the category ''Ligands'' are based on a somewhat different definition, ...
5: In macromolecular structure, ligand has a '''specialized and somewhat different meani...
7: ... addition to moieties ordinarily considered to be ligand, such as metal ions and small organic compounds o...
9: ..., which avoid them being invisible in a backbone-only display such as a secondary structure schematic ... - Category:Ligand binding (50 bytes)
1: List of structures with the keyword Ligand binding - Category:Protein-ligand complex (58 bytes)
1: List of structures with the keyword Protein-ligand complex - Category:Ligand-binding domain (52 bytes)
1: List of pages with the keyword Ligand-binding domain - Category:Retinoid ligand complex (54 bytes)
1: List of pages with the keyword Retinoid ligand complex - Category:Transcriptionally active conformation in absence of ligand (89 bytes)
1: ...anscriptionally active conformation in absence of ligand - Category:Ligand-dependent (47 bytes)
1: List of pages with the keyword Ligand-dependent - Category:Beta ligand substitution (55 bytes)
1: List of pages with the keyword Beta ligand substitution - Category:Ligand binding protein (53 bytes)
1: List of pages with the keyword Ligand binding protein - Category:Enzyme-ligand complex (52 bytes)
1: List of pages with the keyword Enzyme-ligand complex - Category:Ligand (37 bytes)
1: List of pages with the keyword Ligand - Category:Rna-ligand interaction (53 bytes)
1: List of pages with the keyword Rna-ligand interaction - Category:Ligand of annexin ii (51 bytes)
1: List of pages with the keyword Ligand of annexin ii - Category:Ligand binding geometry (54 bytes)
1: List of pages with the keyword Ligand binding geometry - Category:Intermediate in ligand binding (61 bytes)
1: List of pages with the keyword Intermediate in ligand binding - Category:Ligand induced conformational change (67 bytes)
1: List of pages with the keyword Ligand induced conformational change
Page text matches
- Help:Editing (24,612 bytes)
15: ...hat any user can edit, or a protected page, that only you can edit. If you want it to be protected, pl...
76: Optional and only relevant if the frame parameter is set to true.
80: Optional and only relevant if the frame parameter is set to true.
116: ... less flexibility with the Structure Box, as the only parameters you can change are the PDB id and the...
133: {{Template:ColorKey Composition Ligand}} - Acetylcholinesterase (8,905 bytes)
13: ...rtant in the [http://en.wikipedia.org/wiki/Ligand ligand] recognition <ref name="Raves">PMID:8989325</ref>... - Image:Pdb1kvl chain b.pdb (54 bytes)
1: Chain B protein, ligand and waters from PDB entry 1KVL - Image:Pdb1kvl chain A.pdb (54 bytes)
1: Chain B protein, ligand and waters from PDB entry 1KVL - Image:Pdb1kvl chain B.pdb (53 bytes)
1: Chain B protein, ligand and water from PDB entry 1KVL - Hemoglobin (21,535 bytes)
12: ...e" versus the liganded "oxy" or "R state". The unliganded (deoxy) form is called the "T" (for "tense") st...
18: ..., the proximal histidine (the tightest protein Fe ligand) is often called <scene name='32/32/Hisf9/1'>His ...
20: ...ws a subunit in the all-unliganded versus the all-liganded states of Hb; when oxygen binds to just one sub...
31: ...d relative affinities for O<sub>2</sub> and other ligands, by virtue of heme-pocket differences, but the d...
35: ...rictive process also increases the specificity of ligand binding. - 1zk8 (2,708 bytes)
7: ... class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
8: ...s:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1zk... - 1zkd (2,724 bytes)
7: ... class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
8: ...s:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1zk... - Acetylcholine (3,078 bytes)
14: ...rtant in the [http://en.wikipedia.org/wiki/Ligand ligand] recognition. After this binding acetylcholineste... - NADH quinone oxidoreductase (NQO1) with inhibitor dicoumarol (8,927 bytes)
10: ...lime</b></font>. NQO1 residues, participating in ligand interactions, are shown as stick representation a...
14: ...b></font> dimer ([[1d4a]], residues important for ligand interactions are <font color='blue'><b>colored bl...
27: ... 128 and Phe 232 in the hNQO1−ES936 complex is only ~7 Å, while in the hNQO1−dicoumarol complex i... - Streptomyces griseus Aminopeptidase (SGAP) (9,198 bytes)
15: ...as ligands for the second ion. Asp97 is a common ligand to both ions. What appears to be a phosphate ani...
53: ...Mol. Biol.</i> <b>265</b> (620). [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&uid=9048953&cmd=s...
55: .... Commun''. '''172''', 620-626. [http://www.ncbi.nlm.nih.gov/pubmed/2241957?ordinalpos=1&itool=Entrez...
56: ... Sci. USA'' '''78''', 6623-6627. [http://www.ncbi.nlm.nih.gov/pubmed/7031658?ordinalpos=1&itool=Entrez...
57: ...''. (Tokyo) '''62''', 633-641. [http://www.ncbi.nlm.nih.gov/pubmed/4968616?ordinalpos=2&itool=Entrez... - 117e (5,307 bytes)
7: ...N:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
8: ...s:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=117...
24: ...tional studies measuring catalytic efficiency and ligand (metal ion, PPi and Pi) binding, provide strong e... - 1dan (4,927 bytes)
7: ...gand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene></td></tr>
8: ...s:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1da... - 8gpb (5,927 bytes)
6: ...OSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene></td></tr>
7: ...y:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Phosphorylase ...
8: ...s:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.... - 2src (9,009 bytes)
7: ...CID-ADENYLATE+ESTER'>ANP</scene>, <scene name='pdbligand=PTR:O-PHOSPHOTYROSINE'>PTR</scene></td></tr>
8: ...s:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2sr...
13: ...y epidermal growth factor. Might be involved not only in mediating the transduction of mitogenic signa...
26: ... of the regulatory domains, induced by SH2 or SH3 ligands, or by dephosphorylation of Tyr-527, could lead ... - Scene authoring tools (23,035 bytes)
47: ...de water, include or exclude other hetero groups (ligands), load a specified biomolecule (biological unit)...
58: ...ch tab is open. The first line is informational, only; the "currently loaded" text area displays the n...
70: ... other tabs, the change is almost always applied ONLY to the currently selected atoms. That is why it...
80: ... atoms by their number. The 'sites' box appears only if your file is a PDB file that has predefined s...
88: ... residues (or more generally "groups", i.e entire ligand, or building block of nucleic acids and carbohydr... - 1m85 (2,936 bytes)
7: ...T:S-DIOXYMETHIONINE'>OMT</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
8: ...s:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1m8... - 100d (3,251 bytes)
2: ...)-SPERMINE COMPLEX-SPERMINE BINDING TO PHOSPHATE ONLY AND MINOR GROOVE TERTIARY BASE-PAIRING==
7: ... class="sblockDat" id="ligandDat"><scene name='pdbligand=SPM:SPERMINE'>SPM</scene></td></tr>
8: ...s:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=100...
14: ....spermine complex--spermine binding to phosphate only and minor groove tertiary base-pairing.,Ban C, R... - 101d (3,338 bytes)
7: ...and=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NT:NETROPSIN'>NT</scene></td></tr>
8: ...s:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=101... - 101m (2,671 bytes)
7: ...:N-BUTYL+ISOCYANIDE'>NBN</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
8: ...s:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=101...
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