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Article title matches

1. Image:1d66.png (56 bytes)
2. 1d66 (2,878 bytes)
   3: ...ion load='1d66' size='340' side='right'caption='[[1d66]], [[Resolution|resolution]] 2.70Å' scene='...
   5: ...</b> use [https://proteopedia.org/fgij/fg.htm?mol=1D66 FirstGlance]. <br>
   7: ...<td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene></td></tr>
   8: ...https://prosat.h-its.org/prosat/prosatexe?pdbcode=1d66 ProSAT]</span></td></tr>
   16: ...rf_initial_scene = true; script "/wiki/ConSurf/d6/1d66_consurf.spt"</scriptWhenChecked>
3. Image:1d66 polyview anim1 small.gif (0 bytes)

Page text matches

1. Wittman Gal4 Sandbox (1,419 bytes)
   1: [[Image:1d66.png|left|200px]]
   3: {{STRUCTURE_1d66| PDB=1d66 | SCENE= }}
   10: ...om [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D66 OCA].
2. User:Wayne Decatur/UNH BCHEM833 Structural Analysis Workshop Session Fall 2012 (17,130 bytes)
   16: **Have a PDB id for a pertinent structure?
   23: ...er considered for not highlighting in Proteopedia PDB entry pages.</small>
   47: *PDB Entry Pages
   74: ...file types: png, jpg, jpeg, tiff, tif, gif, mgif, pdb, cif, mmcif, cml, mol, xyz, kin, mmol
   104: *[[1d66]] in FirstGlance in Jmol
3. User:Eric Martz/Introduction to Structural Bioinformatics I (15,931 bytes)
   30: #Take a look around Proteopedia. Click on the ''PDB codes'' below, or the ''Random'' links to see oth...
   68: ...DB; [http://www.pdb.org pdb.org]; [[PDB|About the PDB]]).
   70: ... a unique, 4-character accession code called a '''PDB identification code''', for example
   72: :::*[[1d66]]
   81: ...acter PDB code''' of the molecule you choose. The PDB code makes it easy to retrieve the molecule and i...
4. Beck Gal4 sandbox (2,381 bytes)
   2: ...='right' caption='Structure of HMG-CoA reductase (PDB entry [[1dq8]])' scene=''>
   7: [[Image:1d66.png|left|200px]]
   9: {{STRUCTURE_1d66| PDB=1d66 | SCENE= }}
   16: ...om [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D66 OCA].
5. Clegg Gal4 sandbox (2,084 bytes)
   1: [[Image:1d66.png|left|200px]]
   3: {{STRUCTURE_1d66| PDB=1d66 | SCENE= }}
   10: ...om [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D66 OCA].
6. User:Eric Martz/Cavities tests (2,280 bytes)
   3: ...face test 1</scene>: simple surface on chain A of 1d66. Colored translucent green. This surface was gene...
7. FirstGlance in Jmol (5,275 bytes)
   3: ...L]], [[ChimeraX]], or [[Mol*]] offered by the [[wwPDB]].
   5: ...l], you can enter any [[PDB code]], or upload a [[PDB file]] from your computer, such as a prediction b...
8. Hydrogen in macromolecular models (10,118 bytes)
   8: ...he [[PDB file]]. Hydrogens are usually present in PDB files resulting from [[NMR]] analysis, and usuall...
   34: *'''Example: No hydrogens''': The X-ray model in PDB file [[1hho]] for oxyhemoglobin (2.1 A resolution...
   36: ...some authors strip them out before submitting a [[PDB file]] and others leave them in. The [[Protein Da...
   42: ...re usually present in NMR models submitted to the PDB.
   49: ...easy to add hydrogens to macromolecular models ([[PDB files]]) using the highly-reliable free servers l...
9. Getting Unremediated PDB Files (5,391 bytes)
   1: ...7th, 2009 as described on the [http://www.pdb.org/pdb/static.do?p=general_information/news_publications...
   3: ... the March 17th release exists [ftp://snapshots.wwpdb.org/ here] in the directory 20090316.
   5: ...07 is available, as detailed [http://www.rcsb.org/pdb/static.do?p=general_information/news_publications...
   7: If a PDB file was released after December 2, 2008, it is n...
   11: ...These were repaired by obtaining the unremediated PDB files and using them for these scenes.)
10. User:Nikhil Malvankar/MB&B 420a-720a 2019 (19,312 bytes)
    116: ...o small proteins (30 kD or smaller; median NMR in PDB is 10K; median X-ray is 50K).
    121: ...DB; [http://www.pdb.org pdb.org]; [[PDB|About the PDB]]).
    123: ... a unique, 4-character accession code called a '''PDB identification code''', for example
    125: :::*[[1d66]]
    135: ...acter PDB code''' of the molecule you choose. The PDB code makes it easy to retrieve the molecule and i...
11. Ann Taylor sandbox 1 (4,017 bytes)
    2: ...ion load='1d66' size='340' side='right'caption='[[1d66]], [[Resolution|resolution]] 2.70&Aring;' scene='...
    4: ...</b> use [https://proteopedia.org/fgij/fg.htm?mol=1D66 FirstGlance]. <br>
    5: ...<td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene></td></tr>
    6: ...https://prosat.h-its.org/prosat/prosatexe?pdbcode=1d66 ProSAT]</span></td></tr>
    14: ...rf_initial_scene = true; script "/wiki/ConSurf/d6/1d66_consurf.spt"</scriptWhenChecked>
12. Ann taylor sandbox 2 (4,017 bytes)
    2: ...ion load='1d66' size='340' side='right'caption='[[1d66]], [[Resolution|resolution]] 2.70&Aring;' scene='...
    4: ...</b> use [https://proteopedia.org/fgij/fg.htm?mol=1D66 FirstGlance]. <br>
    5: ...<td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene></td></tr>
    6: ...https://prosat.h-its.org/prosat/prosatexe?pdbcode=1d66 ProSAT]</span></td></tr>
    14: ...rf_initial_scene = true; script "/wiki/ConSurf/d6/1d66_consurf.spt"</scriptWhenChecked>
13. Ann Taylor sandbox 3 (4,017 bytes)
    2: ...ion load='1d66' size='340' side='right'caption='[[1d66]], [[Resolution|resolution]] 2.70&Aring;' scene='...
    4: ...</b> use [https://proteopedia.org/fgij/fg.htm?mol=1D66 FirstGlance]. <br>
    5: ...<td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene></td></tr>
    6: ...https://prosat.h-its.org/prosat/prosatexe?pdbcode=1d66 ProSAT]</span></td></tr>
    14: ...rf_initial_scene = true; script "/wiki/ConSurf/d6/1d66_consurf.spt"</scriptWhenChecked>
14. Ann Taylor Sandbox 4 (4,017 bytes)
    2: ...ion load='1d66' size='340' side='right'caption='[[1d66]], [[Resolution|resolution]] 2.70&Aring;' scene='...
    4: ...</b> use [https://proteopedia.org/fgij/fg.htm?mol=1D66 FirstGlance]. <br>
    5: ...<td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene></td></tr>
    6: ...https://prosat.h-its.org/prosat/prosatexe?pdbcode=1d66 ProSAT]</span></td></tr>
    14: ...rf_initial_scene = true; script "/wiki/ConSurf/d6/1d66_consurf.spt"</scriptWhenChecked>
15. User:Ann Taylor/Sandbox 1 (3,914 bytes)
    2: ...ion load='1d66' size='340' side='right'caption='[[1d66]], [[Resolution|resolution]] 2.70&Aring;' scene='...
    4: ...</b> use [https://proteopedia.org/fgij/fg.htm?mol=1D66 FirstGlance]. <br>
    5: ...<td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene></td></tr>
    6: ...https://prosat.h-its.org/prosat/prosatexe?pdbcode=1d66 ProSAT]</span></td></tr>
    14: ...rf_initial_scene = true; script "/wiki/ConSurf/d6/1d66_consurf.spt"</scriptWhenChecked>
16. User:Wayne Decatur/Biochem642 Molecular Visualization Sessions (7,036 bytes)
    8: *[http://www.pdb.org The Protein Data Bank]
    9: ...o?p=general_information/pdb_statistics/index.html PDB Statistics]
    10: **search 1d66 - display text of PDB file
    18: *[[Main Page|Proteopedia]]: [[1d66]]
    23: **FirstGlance in Jmol from [[1d66]] entry in Proteopedia
17. User:Wayne Decatur/Biochem642 Sandbox Steps (15,054 bytes)
    7: ... title text is the 3D Jmol applet window with the 1d66 structure spinning in it.
    14: ... show in the Jmol applet window where you saw the 1d66 structure spinning.
    23: *Click on the 'load molecule' tab and enter 1d66 into the top box. Press the 'load' button.
    24: *Once you see the 1d66 structure in the window to the right (it won't be...
    39: ...;&nbsp;&nbsp;&nbsp;&nbsp;<nowiki><Structure load='1d66' size='300' frame='true' align='right' caption='Y...
18. Practical Guide to Homology Modeling (26,760 bytes)
    31: ...th any of these methods, download the predicted [[PDB file]] and then upload it to [http://firstglance....
    37: ...numerals for the last 3 characters . Examples are 1d66, 4mdh, 9ins.
    39: ...els|empirically-determined 3D structures]] in the PDB.
    45: ...'''PDB entry''' containing 4-character [[PDB code|PDB IDs]], these are empirical structures for your pr...
    46: ...one of these models, write down its 4-character [[PDB code]]. Then see [[#How To Explore 3D Models]] be...
19. Molecular Playground/Procedures (17,667 bytes)
    34: ...pt only the DNA, you could name the file 1d66_dna.pdb. Click on ''Upload file'' in the toolbox section ...
    77: ...''load /*file*/"http://proteopedia.org/cgi-bin/getpdbz?3ckz";
    92: ...nload the file. Rename the file to ''yourMolecule.pdb''. It will help if all the filenames in your modu...
    94: ..., a PDB file which we'll refer to as yourMolecule.pdb, and a yourMolecule_state.spt file. Double-click ...
    96: ...'' In the white window, type '''load yourMolecule.pdb''' and press Enter. The molecule should appear in...
20. Installing and enabling Java (16,241 bytes)
    148: ...rmatics.org/firstglance/fgij/fg.htm?mol=1d66&JAVA 1d66 in Java at FirstGlance in Jmol].
    159: ... link: [http://proteopedia.org/w/1d66?_USE=SIGNED 1d66 with Java in Proteopedia] (see [[Using Java for R...
    161: ...rstglance.jmol.org FirstGlance.Jmol.Org], enter a PDB code (a small one is 3hyd), '''check "Use Java"''...

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