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1. Image:Proteins-cn.jpg (0 bytes)
2. Image:Proteins-cs.jpg (0 bytes)
3. Image:Proteins-quaternary.jpg (0 bytes)
4. Hiv env proteins (9,697 bytes)
   1: ...gp120 trimer in the unliganded state (PDB entry [[3dnn]])' scene=''>
   9: ...brane proteins, located beneath the gp120 surface proteins (located by the white arrow in F2.b), will underg...
   12: ...ltiple contacts centered on residues Asp 368, Glu 370 and Trp427 of gp120, which are all conserved am...
   13: [[Image:3D structure of the HIV-1 spike in complex with CD4...
   17: ...coupled with roation of each <scene name='Hiv_env_proteins/B12_gp120_complex/1'>gp120</scene> monomer by ~20...
5. Knots in proteins (169 bytes)
6. Knots in Proteins: Methods (100 bytes)
   1: ...User:Eric_Martz/Sandbox_11]]. See also [[Knots in proteins]].
7. Category:Alpha and beta class of proteins with mainly parallell strand (92 bytes)
   1: ...of pages with the keyword Alpha and beta class of proteins with mainly parallell strand
8. Category:Designer Proteins (48 bytes)
   1: List of pages with the keyword Designer Proteins
9. Category:Chemotaxis binding proteins for active transport (79 bytes)
   1: List of pages with the keyword Chemotaxis binding proteins for active transport
10. User:James D Watson/Proteins Intro (3,070 bytes)
    1: ==Introduction to proteins==
    8: ...is facilitated by hydrogen bonds from residues Thr35, Gly60 and Lys16. A mechanism for rate enhanceme...
    14: ... Kabsch W, Wittinghofer A, EMBO J. 1990 Aug;9(8):2351-9.
    22: ...ghlights the sequence differences between the two proteins.
    23: ... frame='true' align='left' script='James_D_Watson/Proteins_Intro/Superposition_ras_structures/1' />
11. Category:G Proteins (41 bytes)
    1: List of pages with the keyword G Proteins
12. Category:Ribosomal proteins s15 (53 bytes)
    1: List of pages with the keyword Ribosomal proteins s15
13. Category:Penicillin-binding Proteins (58 bytes)
    1: List of pages with the keyword Penicillin-binding Proteins
14. Category:Interaction coiled-doil proteins with globular protein (85 bytes)
    1: ...of pages with the keyword Interaction coiled-doil proteins with globular protein
15. Image:Proteins.gif (0 bytes)
16. Category:Electron transport proteins complex (66 bytes)
    1: List of pages with the keyword Electron transport proteins complex
17. Category:Degradation of proteins and peptide (66 bytes)
    1: List of pages with the keyword Degradation of proteins and peptide
18. Category:Yjgf proteins family (51 bytes)
    1: List of pages with the keyword Yjgf proteins family
19. James D Watson/Proteins Intro (48 bytes)
    1: #REDIRECT [[User:James D Watson/Proteins Intro]]
20. Class of globular proteins (31 bytes)
    1: #REDIRECT [[Globular Proteins]]

Page text matches

1. Main Page 20190127 (6,331 bytes)
   3: ... Daylight Time USA) till Monday, July 23, 2012 11:30am EDT (Eastern Daylight Time USA)
   13: ...font-size:2.0em; border:none; margin:0; padding:0.3em; color:#000;">Welcome to Proteopedia</span>
   14: ...:5px;">The free, collaborative 3D-encyclopedia of proteins & other molecules</span>
   15: ...t-size:1.2em; padding-right:5px;">'''''ISSN 2310-6301'''''</span>
   19: ...font-size:1.5em; border:none; margin:0; padding:0.3em;font-weight:bold;"> [[Proteopedia:Table of Cont...
2. Sandbox Dav 14 (1,103 bytes)
   1: ...395nm and 475nm). It is one of the most important proteins used in biological research because it can be use...
   5: <applet load='1ema' size='300' frame='true' align='right' caption='GFP' />
   8: ... beta sheets. It is a 26.9kDa protein made up of 238 amino acids. The <scene name='Sandbox_Dav_14/Gfp...
3. Sandbox dav 4 (1,378 bytes)
   1: ...395nm and 475nm). It is one of the most important proteins used in biological research because it can be use...
   5: <applet load='1ema' size='300' frame='true' align='center' caption='gfp' />
   6: ... beta sheets. It is a 26.9kDa protein made up of 238 amino acids. The <scene name='Sandbox_dav_4/Gfp/...
   11: == Related 3D structures ==
   13: <Structure load='6OYH' size='350' frame='true' align='right' caption='Insert cap...
4. Acetylcholinesterase (8,905 bytes)
   1: <StructureSection load='' size='350' side='right' scene='22/22/Ache_with_ach/2' cap...
   8: ...reatment of [http://en.wikipedia.org/wiki/Protein proteins], such as
   11: ...e:Synapse_Schematic.jpg|thumb|Cholinergic Synapse|300px|left]]
   13: ...nd ligand] recognition <ref name="Raves">PMID:8989325</ref>. After this binding acetylcholinesterase ...
   20: *[[Acetylcholinesterase complexed with N-9-(1',2',3',4'-tetrahydroacridinyl)-1,8-diaminooctane]].<br ...
5. Glycine (1,584 bytes)
   1: <applet size="300" frame="true" caption="Glycine is the most simp...
   3: ...nal freedom and is frequently found in [[Turns in Proteins|turns]] along with [[proline]].
   8: ...rough layers of a large molecule. Even better for proteins are [[Backbone representations|schematic backbone...
6. Peptide (2,365 bytes)
   3: ... chains of amino acids are called polypeptides or proteins. Wikipedia offers a good discussion of [http://en...
   6: ...ick representation has too much detail for larger proteins, so the α-carbons are connected with a line call...
7. Hemoglobin (21,535 bytes)
   1: <StructureSection load='1gzx' size='350' side='right' caption="Human Hemoglobin α chai...
   3: ...osthetic group. The <scene name='Hemoglobin/4heme/3'>heme molecules</scene> give hemoglobin its red c...
   9: ...in the β hemoglobin monomer from <scene name='32/32/Hemoglobins_1hho/9'>glutamic acid to a valine</s...
   16: ...right' caption='Human deoxyhemoglobin (PDB code [[3hhb]])'/> -->
   18: ...entral Fe atom bound in a <scene name='Hemoglobin/3hhb_chaina_efpocket/4'>hydrophobic pocket between ...
8. CHEM2052 Tutorial (6,397 bytes)
   2: == '''Chem2052: Example 3 - Serine Proteases''' ==
   4: ...of all known proteolytic enzymes <ref>PMID:17991683</ref>,<ref name="DiCera">PMID:19180666</ref>. Wit...
   6: ...mall differences in amino acid sequence among the proteins, which are reflected in their different specific...
   10: ...e='User:Amy_Kerzmann/Sandbox_5/New_elastase-triad/3'>Elastase</scene>
   18: ... chymotrypsin to the <scene name='59/596400/Morph/3'>trypsin catalytic triad and the elastase catalyt...
9. NADH quinone oxidoreductase (NQO1) with inhibitor dicoumarol (8,927 bytes)
   1: <StructureSection load='2f1o.pdb' size='350' frame='true' side='right' scene='2f1o/Com_view...
   3: [[Image:NQO_Dic copy.jpg|border|left|300px]]
   7: ...coumarin)),[[Image:Figure3 copy.jpg|border|center|300px]] is the most potent competitive inhibitor of...
   8: ...of NQO1 to p53 and induce ubiquitin-independent p53 degradation.
   10: ...each from these two <scene name='2f1o/Active_site/3'>dicoumarol-hNQO1 binding sites</scene> is formed...
10. Help:Contents (6,488 bytes)
    2: ...ia:Overview|Overview]]) is the 3D encyclopedia of proteins and other biological molecules. This is the direc...
    14: ... learn how to get the most out of the interactive 3D scenes, reference the [[Help:Viewing pages|Viewi...
    37: ...i class="fas fa-cubes"></i> For authors: creating 3D scenes===
    38: ... ([[Help:Uploading molecules]]). Tips how to make 3D scenes that have a lot of information yet are ea...
    45: ...xt, embed videos, and integrate different data in 3D scenes, see [[Help:Multimedia]]. Proteopedia hos...
11. Proteopedia:About (7,060 bytes)
    8: ...ce as a '''free, collaborative 3D-encyclopedia of proteins & other biomolecules.'''
    11: ...hare, retrieve and discuss information related to proteins, macromolecules, and small molecules and chemical...
    15: ...rnals via [[I3DC|Interactive 3D Complements - '''I3DCs''']].
    26: ...size:1.25em; font-weight:bold; border:1px solid #a3b0bf; text-align:left; color:#000; padding:0.2em 0...
    61: <ref group='xtra'>PMID 18673581 </ref><references group='xtra'/>
12. 2src (9,009 bytes)
    3: <StructureSection load='2src' size='340' side='right'caption='[[2src]], [[Resolution|re...
    5: ....2210/rcsb_pdb/mom_2003_7 10.2210/rcsb_pdb/mom_2003_7]. The December 2004 RCSB PDB [https://pdb.rcsb....
    13: ...0</ref> <ref>PMID:21411625</ref> <ref>PMID:22710723</ref>
    26: ...ly of the regulatory domains, induced by SH2 or SH3 ligands, or by dephosphorylation of Tyr-527, coul...
    28: ...l. 1999 May;3(5):629-38. PMID:10360179<ref>PMID:10360179</ref>
13. 102l (2,926 bytes)
    3: <StructureSection load='102l' size='340' side='right'caption='[[102l]], [[Resolution|re...
    11: ...nd break down the peptidoglycan layer.<ref>PMID:22389108</ref>
    24: *[[Lysozyme 3D structures|Lysozyme 3D structures]]
14. 103l (2,925 bytes)
    3: ...n load='103l' size='340' side='right'caption='[[103l]], [[Resolution|resolution]] 1.90&Aring;' scene=...
    5: ...b> use [https://proteopedia.org/fgij/fg.htm?mol=103L FirstGlance]. <br>
    8: ...tps://prosat.h-its.org/prosat/prosatexe?pdbcode=103l ProSAT]</span></td></tr>
    11: ...nd break down the peptidoglycan layer.<ref>PMID:22389108</ref>
    16: ..._initial_scene = true; script "/wiki/ConSurf/03/103l_consurf.spt"</scriptWhenChecked>
15. 107l (2,925 bytes)
    3: <StructureSection load='107l' size='340' side='right'caption='[[107l]], [[Resolution|re...
    11: ...nd break down the peptidoglycan layer.<ref>PMID:22389108</ref>
    24: *[[Lysozyme 3D structures|Lysozyme 3D structures]]
16. 108l (2,925 bytes)
    3: <StructureSection load='108l' size='340' side='right'caption='[[108l]], [[Resolution|re...
    11: ...nd break down the peptidoglycan layer.<ref>PMID:22389108</ref>
    24: *[[Lysozyme 3D structures|Lysozyme 3D structures]]
17. 109l (2,926 bytes)
    3: <StructureSection load='109l' size='340' side='right'caption='[[109l]], [[Resolution|re...
    11: ...nd break down the peptidoglycan layer.<ref>PMID:22389108</ref>
    24: *[[Lysozyme 3D structures|Lysozyme 3D structures]]
18. 1mty (5,005 bytes)
    3: <StructureSection load='1mty' size='340' side='right'caption='[[1mty]], [[Resolution|re...
    26: ...ns. 1997 Oct;29(2):141-52. PMID:9329079<ref>PMID:9329079</ref>
    33: ...monooxygenase 3D structures|Methane monooxygenase 3D structures]]
19. 1e4v (4,128 bytes)
    3: <StructureSection load='1e4v' size='340' side='right'caption='[[1e4v]], [[Resolution|re...
    11: ...for maintenance and cell growth.[HAMAP-Rule:MF_00235]
    24: ... kinases, H-ras-p21, and other nucleotide-binding proteins. Mutants at these positions of H-ras-p21 cause ca...
    26: .... 1993 Jan;15(1):42-9. PMID:8451239<ref>PMID:8451239</ref>
    33: ...[[Adenylate kinase 3D structures|Adenylate kinase 3D structures]]
20. 1e4i (5,527 bytes)
    3: <StructureSection load='1e4i' size='340' side='right'caption='[[1e4i]], [[Resolution|re...
    26: ... Lopez-Camacho C, Polaina J Proteins. 1998 Dec 1;33(4):567-76. PMID:9849940<ref>PMID:9849940</ref>
    33: ...[[Beta-glucosidase 3D structures|Beta-glucosidase 3D structures]]

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