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Article title matches

1. Category:Rmsd (35 bytes)
   1: List of pages with the keyword Rmsd
2. Image:Rmsd values of class a gpcr new.jpg (0 bytes)
3. Image:Hits With RMSD Value.png (61 bytes)
   1: Hits with the RMSD Value to be able to see how good they are.

Page text matches

1. NADH quinone oxidoreductase (NQO1) with inhibitor dicoumarol (8,927 bytes)
   14: ...ange'><b>FAD is colored in orange</b></font>. The RMSD between the apo hNQO1 ([[1d4a]]) and hNQO1 in com...
   15: ...ilar to that of hNQO1 in complex with dicoumarol (RMSD is 0.33Å for the 546 Cα atoms). In this case, t...
   27: ...QO1−dicoumarol complex ([[2f1o]]) yields 0.45Å RMSD for the 546 Cα atoms. The ES936 causes structura...
2. 1pfd (4,398 bytes)
   24: ...restrained energy minimization. Root-mean-square (rmsd) deviation values obtained for the family of 18 s...
3. User:Karsten Theis/Rigid body interpolation (4,709 bytes)
   43: // Calculate lowest RMSD superposition of sel1 and sel2 as 4x4 matrix
4. 1axx (4,918 bytes)
   24: ...through restrained energy minimization. The final RMSD values with respect to the average structure are ...
5. 1cc3 (4,910 bytes)
   24: ...al, and they have nearly identical conformations (rmsd of 0.27 A for backbone atoms). The purple CuA azu...
6. 1xga (4,315 bytes)
   14: ...is of excellent quality, with a backbone pairwise RMSD of 0.16 A for a family of 35 structures, and comp...
7. 2lzw (3,885 bytes)
   12: ...global structures were virtually identical with a RMSD of 1.22 A. The ICL was found to reside in the maj...
8. 2mfn (6,410 bytes)
   23: ...1(+/-0.12) and 0.40(+/-0.07) A, respectively, the rmsd of the core atom coordinates increases to 3.63(+/...
9. 1mfn (6,410 bytes)
   23: ...1(+/-0.12) and 0.40(+/-0.07) A, respectively, the rmsd of the core atom coordinates increases to 3.63(+/...
10. 1aj1 (4,225 bytes)
    13: ... and 7-19 were even better defined, with backbone rmsd of 10 pm and 14 pm, respectively. Actagardine sho...
11. 4i1y (4,403 bytes)
    14: ... overall sequence identity had active site Calpha RMSD &lt;1 A, &gt;85% side chain identity, and &gt;/=8...
12. 2c9e (4,733 bytes)
    24: ...Despite the high degree of structural similarity (rmsd C(alpha)-C(alpha) of 1.89 A), the sequence variat...
13. 1ab9 (5,596 bytes)
    24: ...ell with that of gamma-chymotrypsin per se with a rmsd of 0.13 A for all the C alpha carbons. Two inhibi...
14. 1grv (4,819 bytes)
    24: ...e to that of Tritrichomonas foetus HGXPRT, with a rmsd for 150 Calpha atoms of 1.0 A. Comparison of the ...
15. Calculating GDT TS (7,056 bytes)
    2: ...fold than is the ''Root Mean Square Deviation''. "RMSD uses the actual distances between alpha carbons, ...
    31: ...esults for Run 1, you may be interested in the '''RMSD''' and '''Seq_Id''' for the superposition deemed ...
16. 1afq (5,722 bytes)
    24: ...ell with that of gamma-chymotrypsin per se with a rmsd of 0.13 A for all the C alpha carbons. Two inhibi...
17. 2lvv (3,136 bytes)
    13: ...t, similar to the overall fold of T. cruzi FCaBP (RMSD = 1.0 A). A cluster of basic residues (K22, K25, ...
18. 1gce (4,877 bytes)
    23: ...0, Asn152, Lys318, and Ser321 deviate only 0.4 A (rmsd) from atoms in P99. A rotation of a potential cat...
19. 1vre (4,840 bytes)
    24: ...ile the backbone atoms of the F helix have higher rmsds and larger measures of dynamics on the microseco...
20. 1vrf (4,840 bytes)
    24: ...ile the backbone atoms of the F helix have higher rmsds and larger measures of dynamics on the microseco...

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