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Image:Cycle of the small G protein Rab.jpg (0 bytes)
Image:Small wh ray0001.gif (52 bytes)
1: Small white rocking movie of AChE looking down gorge
Image:1IH5 cavities xfine small 2 5 20 24.pdb (83 bytes)
Image:Lacrep anim small.gif (202 bytes)
1: ... bound to DNA, changing from non-specific to specific recognition. [http://www.umass.edu/microbio/chi...
Image:Consurf key small.gif (51 bytes)
1: Color key for the ConSurf server, consurf.tau.ac.il
Category:Small molecule (45 bytes)
1: List of pages with the keyword Small molecule
Category:Small g-protein (46 bytes)
1: List of pages with the keyword Small g-protein
Category:Small g protein (46 bytes)
1: List of pages with the keyword Small g protein
Category:Small subunit (44 bytes)
1: List of pages with the keyword Small subunit
Category:Small highly disulfide bonded (60 bytes)
1: List of pages with the keyword Small highly disulfide bonded
Category:Small gtpase (43 bytes)
1: List of pages with the keyword Small gtpase
Category:Small c-terminal domain (54 bytes)
1: List of pages with the keyword Small c-terminal domain
Category:Small p-protein (46 bytes)
1: List of pages with the keyword Small p-protein
Category:Small-conductance calcium-activated potassium channel (84 bytes)
1: List of pages with the keyword Small-conductance calcium-activated potassium channel
Category:Small heat shock protein (55 bytes)
1: List of pages with the keyword Small heat shock protein
Category:Small ubiquitin-like modifier (60 bytes)
1: ...f pages with the keyword Small ubiquitin-like modifier
Category:Small gtp-binding protein (56 bytes)
1: List of pages with the keyword Small gtp-binding protein
Category:Arf small gtp-binding protein (60 bytes)
1: List of pages with the keyword Arf small gtp-binding protein
Category:Small molecule complex (53 bytes)
1: List of pages with the keyword Small molecule complex
Category:Protein-small molecule complex (61 bytes)
1: List of pages with the keyword Protein-small molecule complex

Page text matches

Help:Editing (24,612 bytes)
1: <center><table style='background:#ffd8d8;' cellpadding='6'><tr><td>
2: Before using this page, you may find it useful to consult [[Proteopedia:Getting_Started|Help:G...
6: ...th wikitext, and Proteopedia uses the same wiki software.
9: ==Use Sandboxes for practice editing==
10: ... before saving permanent edits on other pages. In fact, a protected Sandbox is a good place to develo...
Acetylcholinesterase (8,905 bytes)
1: ...cene='22/22/Ache_with_ach/2' caption='Torpedo california AChE (PDB code [[2ace]])'>
2: [[Image:small_wh_ray0001.gif|left|150px]] 
3: ... Alzheimer's disease (AD). The powerful toxicity of organophosphorus (OP) poisons is attributed prima...
8: ...advances in theoretical techniques for treatment of [http://en.wikipedia.org/wiki/Protein proteins], ...
11: ...e_Schematic.jpg|thumb|Cholinergic Synapse|300px|left]]
CHEM2052 Tutorial (6,397 bytes)
4: ...nique specificities of these enzymes make them useful tools in biochemistry and molecular biology to ...
6: ... a classic example of how '''''structure dictates function'''''!
13: ...ic triad</scene>. The elements are color coded as follows: {{Template:ColorKey_Element_C}}, {{Templat...
14: ...e mouse pointer or in the lower left-hand corner of the browser window.)
15: ...each image and select a different zoom percentage from the main menu.
NADH quinone oxidoreductase (NQO1) with inhibitor dicoumarol (8,927 bytes)
1: ... dehydrogenase complex with FAD and dicoumarol [[2f1o]]'>
2: == The crystal structure of NADH quinone oxidoreductase (NQO1) in complex wit...
3: [[Image:NQO_Dic copy.jpg|border|left|300px]]
5: ...wiki/Catalysis catalyzes] two electron reduction of [http://en.wikipedia.org/wiki/Quinone quinones] t...
6: ...ificant overlap, thus providing a molecular basis for this “ping pong” mechanism.
Proteopedia:About (7,060 bytes)
4: ==[[Proteopedia:Overview|Overview of Proteopedia]]==
5: ...s of Contents, and Usage Statistics. More details follow below.
8: ...ence as a '''free, collaborative 3D-encyclopedia of proteins & other biomolecules.'''
10: ==Goals for Proteopedia==
11: ...acromolecules, and small molecules and chemicals of interest.
Streptomyces griseus Aminopeptidase (SGAP) (9,198 bytes)
3: ...thumb | S griseus aminopeptidase, showing overall fold. Zinc ions are dark grey, calcium ion is whit...
6: ==Biological function==
7: ...ic acids, especially leucine. No cleavage occurs if the next residue is proline.
9: [[Image:aminopeptidase_rxn2.png | left | thumb| 500px | Reaction catalyzed by SGAP; sci...
11: ==Structural features==
105d (3,136 bytes)
2: ==SOLUTION STRUCTURES OF THE I-MOTIF TETRAMERS OF D(TCC), D(5MCCT) AND D(T5MCC). NOVEL NOE CONNECTI...
5: ...use [https://proteopedia.org/fgij/fg.htm?mol=105D FirstGlance]. 
7: ...ks'>[https://proteopedia.org/fgij/fg.htm?mol=105d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/oc...
9: <div style="background-color:#fffaf0;">
10: == Publication Abstract from PubMed ==
1e4v (4,128 bytes)
2: ...Mutant G10V of adenylate kinase from E. coli, modified in the Gly-loop==
5: ...use [https://proteopedia.org/fgij/fg.htm?mol=1E4V FirstGlance]. 
6: .../td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85Å</td...
8: ...ks'>[https://proteopedia.org/fgij/fg.htm?mol=1e4v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/oc...
10: == Function ==
1e4y (4,127 bytes)
2: ...=Mutant P9L of adenylate kinase from E. coli, modified in the Gly-loop==
5: ...use [https://proteopedia.org/fgij/fg.htm?mol=1E4Y FirstGlance]. 
6: .../td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85Å</td...
8: ...ks'>[https://proteopedia.org/fgij/fg.htm?mol=1e4y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/oc...
10: == Function ==
1rrl (4,805 bytes)
5: ...use [https://proteopedia.org/fgij/fg.htm?mol=1RRL FirstGlance]. 
6: .../td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.09Å</td...
7: ...igandDat"><scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene></td></tr>
8: ...ks'>[https://proteopedia.org/fgij/fg.htm?mol=1rrl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/oc...
10: == Function ==
Sandbox 781 (8,140 bytes)
1: =Crystal structure of MraY bound to carbacaprazamycin, 6OYH =
3: ...ze='340' side='right' caption='Crystal structure of two MraY dimers'>
9: ...srchmode=5&id=224324 ''Aquifex aeolicus'' strain VF5] (MraYAA) in complex with carbacaprazamycin.MraY...
13: ...uridine moiety <ref name="seven">PMID:31266949</ref>
15: = Function =
1rrh (4,819 bytes)
5: ...use [https://proteopedia.org/fgij/fg.htm?mol=1RRH FirstGlance]. 
6: .../td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></...
7: ...igandDat"><scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene></td></tr>
8: ...ks'>[https://proteopedia.org/fgij/fg.htm?mol=1rrh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/oc...
10: == Function ==
2bol (5,044 bytes)
2: ...YSTAL STRUCTURE AND ASSEMBLY OF TSP36, A METAZOAN SMALL HEAT SHOCK PROTEIN==
5: ...use [https://proteopedia.org/fgij/fg.htm?mol=2BOL FirstGlance]. 
6: .../td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5Å</td>...
7: ...Dat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
8: ...ks'>[https://proteopedia.org/fgij/fg.htm?mol=2bol FirstGlance], [http://oca.weizmann.ac.il/oca-bin/oc...
1boa (4,552 bytes)
2: ...PEPTIDASE 2 COMPLEXED WITH ANGIOGENESIS INHIBITOR FUMAGILLIN==
5: ...use [https://proteopedia.org/fgij/fg.htm?mol=1BOA FirstGlance]. 
6: .../td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td>...
7: ...O</scene>, <scene name='pdbligand=FUG:FUMAGILLIN'>FUG</scene></td></tr>
8: ...ks'>[https://proteopedia.org/fgij/fg.htm?mol=1boa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/oc...
2cni (5,849 bytes)
2: ...eptidic Isothiazolidinone- Containing Inhibitors of Protein Tyrosine Phosphatase 1B==
5: ...use [https://proteopedia.org/fgij/fg.htm?mol=2CNI FirstGlance]. 
6: .../td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></...
7: ...ENYLALANYL}AMINO)PENTYL]OXY}-6-HYDROXYBENZOATE'>IZF</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'...
8: ...ks'>[https://proteopedia.org/fgij/fg.htm?mol=2cni FirstGlance], [http://oca.weizmann.ac.il/oca-bin/oc...
2cn5 (7,986 bytes)
2: ==Crystal structure of human Chk2 in complex with ADP==
5: ...use [https://proteopedia.org/fgij/fg.htm?mol=2CN5 FirstGlance]. 
6: .../td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.25Å</td...
8: ...ks'>[https://proteopedia.org/fgij/fg.htm?mol=2cn5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/oc...
11: ...8).<ref>PMID:12094328</ref> <ref>PMID:21618645</ref>
2cnh (5,858 bytes)
2: ...eptidic Isothiazolidinone- Containing Inhibitors of Protein Tyrosine Phosphatase 1B==
5: ...use [https://proteopedia.org/fgij/fg.htm?mol=2CNH FirstGlance]. 
6: .../td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td>...
7: ...HYL]-4-METHYL-3,4-DIHYDRO-2H-1,4-BENZOXAZINE-7-SULFONAMIDE'>IZB</scene></td></tr>
8: ...ks'>[https://proteopedia.org/fgij/fg.htm?mol=2cnh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/oc...
2cn8 (7,949 bytes)
2: ==Crystal structure of human Chk2 in complex with debromohymenialdisine=...
5: ...use [https://proteopedia.org/fgij/fg.htm?mol=2CN8 FirstGlance]. 
6: .../td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7Å</td>...
8: ...ks'>[https://proteopedia.org/fgij/fg.htm?mol=2cn8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/oc...
11: ...8).<ref>PMID:12094328</ref> <ref>PMID:21618645</ref>
2cng (5,901 bytes)
2: ...eptidic Isothiazolidinone- Containing Inhibitors of Protein Tyrosine Phosphatase 1B==
5: ...use [https://proteopedia.org/fgij/fg.htm?mol=2CNG FirstGlance]. 
6: .../td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9Å</td>...
7: ...LUOROMETHYL)-1H-BENZIMIDAZOL-2-YL]ETHYL}-2,2,2-TRIFLUOROACETAMIDE'>IZE</scene>, <scene name='pdbligan...
8: ...ks'>[https://proteopedia.org/fgij/fg.htm?mol=2cng FirstGlance], [http://oca.weizmann.ac.il/oca-bin/oc...
2cne (5,882 bytes)
2: ...eptidic Isothiazolidinone- Containing Inhibitors of Protein Tyrosine Phosphatase 1B==
5: ...use [https://proteopedia.org/fgij/fg.htm?mol=2CNE FirstGlance]. 
6: .../td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td>...
7: ...AMIDE'>DFJ</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
8: ...ks'>[https://proteopedia.org/fgij/fg.htm?mol=2cne FirstGlance], [http://oca.weizmann.ac.il/oca-bin/oc...

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