Search results

From Proteopedia

There is no page with the exact title "Staple,_D.W.". The search results for "Staple,_D.W." are displayed below. You can create a page titled Staple,_D.W. (by clicking on the red link).

For more information about searching Proteopedia, see Help.

Showing below up to 20 results starting with #1.

Article title matches

1. Category:Staple (37 bytes)
   1: List of pages with the keyword Staple
2. Image:2HF4 hydrophobic staple and helix loop helix IMAGE.png (0 bytes)
3. Category:Hydrocarbon staple (49 bytes)
   1: List of pages with the keyword Hydrocarbon staple
4. Category:Hydrocarbon-staple (49 bytes)
   1: List of pages with the keyword Hydrocarbon-staple
5. Category:Aliphatic staple (47 bytes)
   1: List of pages with the keyword Aliphatic staple
6. Category:Side-chain staple (48 bytes)
   1: List of pages with the keyword Side-chain staple
7. Category:Staple, D W (42 bytes)
   1: List of pages with the keyword Staple, D W
8. Category:Staple peptide (45 bytes)
   1: List of pages with the keyword Staple peptide
9. Category:Staple DW (40 bytes)
   1: List of pages with the keyword Staple DW
10. Category:Staple, D.W (42 bytes)
    1: List of pages with the keyword Staple, D.W

Page text matches

1. 1pjy (2,789 bytes)
   5: ...imental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PJY OCA]. For a...
   7: ...pdb/explore.do?structureId=1pjy RCSB], [https://www.ebi.ac.uk/pdbsum/1pjy PDBsum], [https://prosat.h-...
   11: ...A tetraloop structure is nearly identical to a known tetraloop fold, previously identified in the RNa...
   13: ... HIV-1 frameshift inducing stem-loop RNA.,Staple DW, Butcher SE Nucleic Acids Res. 2003 Aug 1;31(15):...
   24: [[Category: Staple DW]]
2. 1z2j (3,123 bytes)
   5: ...imental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z2J OCA]. For a...
   7: ...pdb/explore.do?structureId=1z2j RCSB], [https://www.ebi.ac.uk/pdbsum/1z2j PDBsum], [https://prosat.h-...
   11: ...been solved. The lower helix must denature to allow the ribosome access to the slippery site, but lik...
   13: ...of the HIV-1 frameshift inducing element.,Staple DW, Butcher SE J Mol Biol. 2005 Jun 24;349(5):1011-2...
   25: [[Category: Staple DW]]
3. 9eoq (2,821 bytes)
   5: ...graphic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9EOQ OCA]. For a...
   7: ...pdb/explore.do?structureId=9eoq RCSB], [https://www.ebi.ac.uk/pdbsum/9eoq PDBsum], [https://prosat.h-...
   11: ... alignment framework in a host-guest model, where we successfully resolved an 8 kDa thrombin binding ...
4. 2juk (3,247 bytes)
   5: ...imental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JUK OCA]. For a...
   8: ...pdb/explore.do?structureId=2juk RCSB], [https://www.ebi.ac.uk/pdbsum/2juk PDBsum], [https://prosat.h-...
   12: ...oove and form the binding interface with the RNA, whereas rings III and IV are exposed to the solvent...
   14: ...elix.,Staple DW, Venditti V, Niccolai N, Elson-Schwab L, Tor Y, Butcher SE Chembiochem. 2008 Jan 4;9(...
   25: [[Category: Elson-Schwab L]]
5. 2jtp (3,164 bytes)
   5: ...imental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JTP OCA]. For a...
   7: ...pdb/explore.do?structureId=2jtp RCSB], [https://www.ebi.ac.uk/pdbsum/2jtp PDBsum], [https://prosat.h-...
   11: ... suggest that HIV-2 RNA forms the same structure. We conclude that, like the main sub-groups of HIV-1...
   13: ... structured RNA stem-loop.,Marcheschi RJ, Staple DW, Butcher SE J Mol Biol. 2007 Oct 26;373(3):652-63...
   25: [[Category: Staple DW]]
6. 2jof (3,132 bytes)
   5: ...imental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JOF OCA]. For a...
   7: ...pdb/explore.do?structureId=2jof RCSB], [https://www.ebi.ac.uk/pdbsum/2jof PDBsum], [https://prosat.h-...
   11: ...ion as well as Trp burial. The Y3/P19 hydrophobic staple interaction defines the folding motif as an 18-re...
   13: ...Barua B, Lin JC, Williams VD, Kummler P, Neidigh JW, Andersen NH Protein Eng Des Sel. 2008 Mar;21(3):...
7. 2m36 (3,260 bytes)
   5: ...imental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2M36 OCA]. For a...
   6: ...pdb/explore.do?structureId=2m36 RCSB], [https://www.ebi.ac.uk/pdbsum/2m36 PDBsum], [https://prosat.h-...
   9: [https://www.uniprot.org/uniprot/TXP3_APOSC TXP3_APOSC]
   12: ...enoms that act as gating modifiers by interacting with one or more of the four voltage-sensing domain...
8. 3hyb (4,786 bytes)
   5: ...graphic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HYB OCA]. For a...
   8: ...pdb/explore.do?structureId=3hyb RCSB], [https://www.ebi.ac.uk/pdbsum/3hyb PDBsum], [https://prosat.h-...
   11: ...erminus and probably preventing its reassociation with chaperonin GroEL-ES. At the same time the peri...
   16: ...script "/wiki/ConSurf/hy/3hyb_consurf.spt"</scriptWhenChecked>
   17: ...tensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
9. 2wvw (5,355 bytes)
   3: ...'340' side='right' viewer='molstar' caption='[[2wvw]], [[Resolution|resolution]] 9.00&Aring;' scene='...
   5: ...> use [https://proteopedia.org/fgij/fg.htm?mol=2WVW FirstGlance]. <br>
   6: ...</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1rsc|1rsc]], [[1rbl|1r...
   7: ...phosphate carboxylase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1...
   8: ...ps://prosat.h-its.org/prosat/prosatexe?pdbcode=2wvw ProSAT]</span></td></tr>
10. 3mk8 (4,430 bytes)
    5: ...graphic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MK8 OCA]. For a...
    8: ...pdb/explore.do?structureId=3mk8 RCSB], [https://www.ebi.ac.uk/pdbsum/3mk8 PDBsum], [https://prosat.h-...
    11: ...oliferation. Mediates its effects by interactions with a number of other regulators of apoptosis. Iso...
    16: ...script "/wiki/ConSurf/mk/3mk8_consurf.spt"</scriptWhenChecked>
    17: ...tensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
11. Category:Staple (37 bytes)
    1: List of pages with the keyword Staple
12. User:Cody Couperus/Sandbox 1 (15,541 bytes)
    1: ...ve site residues Ser195, Asp102, and His57 are viewed in ball and stick form.' scene='58/583418/Thomb...
    3: ... [[Fibrinogen | fibrinogen]] to insoluable fibrin which spontaneously polymerizes to form a stable cl...
    5: ... platelets through their [http://en.wikipedia.org/wiki/Protease-activated_receptor protease activated...
    6: ...wikipedia.org/wiki/ADAMTS13 ADAMTS13] <ref name="two">PMID: 15388580</ref><ref name="three">PMID: 159...
    7: * Enhancing its own production through [[Factor_XI | FXI]] activatio...
13. Non-polymerizable monomeric actin (17,397 bytes)
    1: ...x_1/2hf4_blue_helix2/1' caption='Actin 5C complex with ATP and Ca+2 ion (PDB code [[2hf4]])'>
    2: ...tructures are shown below as a morph between the two states.
    6: ...ing proteins. The <scene name='User:Thomas_E_Sladewski/Sandbox_1/2hf4_s-loop/2'>S-loop </scene>
    7: ...es 11-16) and the <scene name='User:Thomas_E_Sladewski/Sandbox_1/2hf4_g-loop/2'> G-loop </scene> (res...
    9: ... point mutations, <scene name='User:Thomas_E_Sladewski/Sandbox_1/2hf4_ap_mut/1'> Ala204Glu and Pro243...
14. 2leg (4,167 bytes)
    2: ...complex DsbB-DsbA structure by joint calculations with solid-state NMR and X-ray experimental data==
    5: ...imental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LEG OCA]. For a...
    7: ...pdb/explore.do?structureId=2leg RCSB], [https://www.ebi.ac.uk/pdbsum/2leg PDBsum], [https://prosat.h-...
    10: ... acts between DsbA/DsbB and PhoP/PhoQ in this pathway.<ref>PMID:1429594</ref> <ref>PMID:22267510</ref...
    13: ...able, and is particularly useful for the study of weakly diffracting crystals.
15. Thrombin (18,531 bytes)
    1: ...in large (red) and small (green) subunits complex with prolinamide derivative (PDB code [[1ppb]])'>
    3: ...e was not isolated to prothrombin alone (http://www.uniprot.org/citations/15534175) (these links adde...
    5: * [[Sean Swale/Human Thrombin Inhibitor]]<br />
    8: * [[Thrombin (hebrew)]]<br />
    10: ...f [[Fibrinogen | fibrinogen]] to insoluble fibrin which spontaneously polymerizes to form a stable cl...
16. 3v3b (4,897 bytes)
    2: ==Structure of the Stapled p53 Peptide Bound to Mdm2==
    5: ...graphic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3V3B OCA]. For a...
    8: ...pdb/explore.do?structureId=3v3b RCSB], [https://www.ebi.ac.uk/pdbsum/3v3b PDBsum], [https://prosat.h-...
    11: ...ladder carcinomas. Four of the splice variants show loss of p53 binding.
    13: ...h links growth factor and DNA damage response pathways. Mediates ubiquitination and subsequent protea...
17. 2m7c (2,312 bytes)
    2: ...-cage: Fold Rescue upon Addition of a Hydrophobic Staple==
    5: ...imental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2M7C OCA]. For a...
    7: ...pdb/explore.do?structureId=2m7c RCSB], [https://www.ebi.ac.uk/pdbsum/2m7c PDBsum], [https://prosat.h-...
    11: ...observed for the original topology, a hydrophobic staple near the chain termini is required for enhanced f...
    13: ...dition of a Hydrophobic Staple.,Byrne A, Kier BL, Williams DV, Scian M, Andersen NH RSC Adv. 2013 Nov...
18. 2m7d (2,343 bytes)
    2: ==Trp-cage 16b P12W: a Hyperstable Miniprotein==
    5: ...imental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2M7D OCA]. For a...
    8: ...pdb/explore.do?structureId=2m7d RCSB], [https://www.ebi.ac.uk/pdbsum/2m7d PDBsum], [https://prosat.h-...
    12: ...observed for the original topology, a hydrophobic staple near the chain termini is required for enhanced f...
    14: ...dition of a Hydrophobic Staple.,Byrne A, Kier BL, Williams DV, Scian M, Andersen NH RSC Adv. 2013 Nov...
19. 4n5t (4,163 bytes)
    2: ==The 1.7A Crystal Structure of MDMX with a Stapled Peptide, ATSP-7041==
    5: ...graphic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4N5T OCA]. For a...
    8: ...pdb/explore.do?structureId=4n5t RCSB], [https://www.ebi.ac.uk/pdbsum/4n5t PDBsum], [https://prosat.h-...
    11: [https://www.uniprot.org/uniprot/MDM4_DANRE MDM4_DANRE] Inhibits p53- and p73-mediated cell cycle ar...
    14: ...trates in vitro and in vivo proof-of-concept that stapled peptides can be developed as therapeutically rel...
20. Image:Capping.png (441 bytes)
    1: ... (N’) and Val234 (N4) termed the “hydrophobic staple.” This motif derives it’s name from the box s...

View (previous 20) (next 20) (20 | 50 | 100 | 250 | 500)