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Article title matches
- Group:SMART:Acetylcholinesterase:A Story of Substrate Traffic and Inhibition by Green Mamba Snake Toxin (11,309 bytes)
1: =='''Acetylcholinesterase: A Story of Substrate Traffic and Inhibition'''==
2: ...l Mata, and Marisa VanBrakle, Hostos-Lincoln Academy.
4: Teacher: Allison Granberry, Hostos-Lincoln Academy
6: ...Science, and Lars Westblade, Touro College of Pharmacy.
12: ...lexed with a modeled ACh molecule ligand, and a complex of FAS-II with ''Tc''AChE. - Category:Story, R M (41 bytes)
1: List of pages with the keyword Story, R M - Category:Story, R W (41 bytes)
1: List of pages with the keyword Story, R W - Category:Story RM (39 bytes)
1: List of pages with the keyword Story RM - Category:Story RW (39 bytes)
1: List of pages with the keyword Story RW
Page text matches
- 1z3k (5,002 bytes)
2: ... Tyr-Phosphorylated Human EphrinBs and Nck2 SH2 Domain==
5: ...ents</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Z3K FirstGlance]. <br>
6: ...td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
7: ...3k RCSB], [https://www.ebi.ac.uk/pdbsum/1z3k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbc...
10: ...ated Ras signaling.<ref>PMID:10026169</ref> <ref>PMID:16835242</ref> - Group:SMART:A Physical Model of the beta-Adrenergic Receptor (6,969 bytes)
1: ...- from the Madison West High School 2008 SMART Team</font>==
4: ...0">http://www.youtube.com/embed/It6C4KIJhwc</html5media>
8: ...ne example of a GPCR targeted by pharmaceutical companies is the β2-adrenergic receptor. Adrenergic...
10: ...nderstand GPCRs as well as understand the mechanism of h
12: ormone/drug binding, which will aid in d - 1hv8 (3,737 bytes)
2: ...E OF A DEAD BOX PROTEIN FROM THE HYPERTHERMOPHILE METHANOCOCCUS JANNASCHII==
5: ...ents</b> use [https://proteopedia.org/fgij/fg.htm?mol=1HV8 FirstGlance]. <br>
6: ...odels|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resoluti...
7: ...igand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr...
8: ...v8 RCSB], [https://www.ebi.ac.uk/pdbsum/1hv8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbc... - 1lbv (4,834 bytes)
2: ... (P21) of dual activity FBPase/IMPase (AF2372) from Archaeoglobus fulgidus==
5: ...ents</b> use [https://proteopedia.org/fgij/fg.htm?mol=1LBV FirstGlance]. <br>
6: ...odels|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resoluti...
7: ...bv RCSB], [https://www.ebi.ac.uk/pdbsum/1lbv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbc...
10: ...MID:10747806</ref> <ref>PMID:11062561</ref> <ref>PMID:11940584</ref> - 1lbw (4,832 bytes)
2: ... (P32) of dual activity FBPase/IMPase (AF2372) from Archaeoglobus fulgidus==
5: ...ents</b> use [https://proteopedia.org/fgij/fg.htm?mol=1LBW FirstGlance]. <br>
6: ...odels|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resoluti...
7: ...bw RCSB], [https://www.ebi.ac.uk/pdbsum/1lbw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbc...
10: ...MID:10747806</ref> <ref>PMID:11062561</ref> <ref>PMID:11940584</ref> - 1lbx (5,120 bytes)
2: ...om Archaeoglobus fulgidus with Calcium ions and D-myo-Inositol-1-Phosphate==
5: ...ents</b> use [https://proteopedia.org/fgij/fg.htm?mol=1LBX FirstGlance]. <br>
6: ...odels|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resoluti...
7: ...IUM+ION'>CA</scene>, <scene name='pdbligand=IPD:D-MYO-INOSITOL-1-PHOSPHATE'>IPD</scene></td></tr>
8: ...bx RCSB], [https://www.ebi.ac.uk/pdbsum/1lbx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbc... - 1lby (5,202 bytes)
2: ...MPase (AF2372) from Archaeoglobus fulgidus with 3 Manganese ions, Fructose-6-Phosphate, and Phosphate...
5: ...ents</b> use [https://proteopedia.org/fgij/fg.htm?mol=1LBY FirstGlance]. <br>
6: ...odels|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resoluti...
7: ...igand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></...
8: ...by RCSB], [https://www.ebi.ac.uk/pdbsum/1lby PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbc... - 1lbz (5,135 bytes)
2: ...(AF2372) from Archaeoglobus fulgidus with 3 Calcium ions and Fructose-1,6 bisphosphate==
5: ...ents</b> use [https://proteopedia.org/fgij/fg.htm?mol=1LBZ FirstGlance]. <br>
6: ...odels|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resoluti...
7: ...e='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FBP:BETA-FRUCTOSE-1,6-DIPHOSPHATE'>FB...
8: ...bz RCSB], [https://www.ebi.ac.uk/pdbsum/1lbz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbc... - 1rea (3,094 bytes)
2: ==STRUCTURE OF THE RECA PROTEIN-ADP COMPLEX==
5: ...ents</b> use [https://proteopedia.org/fgij/fg.htm?mol=1REA FirstGlance]. <br>
6: ...odels|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resoluti...
7: .../td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</sce...
8: ...ea RCSB], [https://www.ebi.ac.uk/pdbsum/1rea PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbc... - 2reb (2,624 bytes)
2: ...CTURE OF THE E. COLI RECA PROTEIN MONOMER AND POLYMER==
5: ...ents</b> use [https://proteopedia.org/fgij/fg.htm?mol=2REB FirstGlance]. <br>
6: ...odels|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resoluti...
7: ...eb RCSB], [https://www.ebi.ac.uk/pdbsum/2reb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbc...
10: ...leading to its autocatalytic cleavage.[HAMAP-Rule:MF_00268] - Eric Martz's Favorites (2,342 bytes)
1: ==Eric Martz's Favorites==
3: ...s transition are [[Recoverin, a calcium-activated myristoyl switch|shown]].
5: ...n 2004 ([[1osl]]) made possible a [[Lac repressor|morph of the DNA bending during specific recognitio...
7: * 2004 - [[The Bacterial Flagellar Hook]], a molecular universal joint.
9: ...nduced fit". Another surprise was a cavity near tamiflu that could serve as a target for designing be... - 2jji (4,611 bytes)
2: ==Endothiapepsin in complex with a gem-diol inhibitor.==
5: ...ents</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JJI FirstGlance]. <br>
6: ...odels|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resoluti...
7: ...+ION'>SO4</scene>, <scene name='pdbligand=SUI:(3-AMINO-2,5-DIOXO-1-PYRROLIDINYL)ACETIC+ACID'>SUI</sce...
8: ...ji RCSB], [https://www.ebi.ac.uk/pdbsum/2jji PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbc... - 2jjj (4,608 bytes)
2: ==Endothiapepsin in complex with a gem-diol inhibitor.==
5: ...ents</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JJJ FirstGlance]. <br>
6: ...odels|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resoluti...
7: ...+ION'>SO4</scene>, <scene name='pdbligand=SUI:(3-AMINO-2,5-DIOXO-1-PYRROLIDINYL)ACETIC+ACID'>SUI</sce...
8: ...jj RCSB], [https://www.ebi.ac.uk/pdbsum/2jjj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbc... - 2vs2 (4,648 bytes)
2: ...n structure of endothiapepsin in complex with a gem- diol inhibitor.==
5: ...ents</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VS2 FirstGlance]. <br>
6: ...odels|Method:]]</b></td><td class="sblockDat" id="methodDat">Neutron Diffraction, [[Resolution|Resolu...
7: ...ATER'>DOD</scene>, <scene name='pdbligand=SUI:(3-AMINO-2,5-DIOXO-1-PYRROLIDINYL)ACETIC+ACID'>SUI</sce...
8: ...s2 RCSB], [https://www.ebi.ac.uk/pdbsum/2vs2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbc... - Hoelzer Sandbox (7,639 bytes)
1: ='''<font color = 'black'> A Physical Model of the β2-Adrenergic Receptor</font>'''=
3: ...- from the Madison West High School 2008 SMART Team</font>'''==
5: :Students -- Dianna Amasino, Axel Glaubitz, Susan Huang, Joy Li, Hsien-Y...
9: ...Jim Keck, Ph.D., University of Wisconsin-Madison, Madison, WI
14: ...true' align='left' scene='Hoelzer_Sandbox/First_image/1'/> - 2w5f (4,727 bytes)
2: ...a-D-xylanase 10B (Xyn10B) CBM22-1- GH10 modules complexed with xylohexaose==
5: ...ents</b> use [https://proteopedia.org/fgij/fg.htm?mol=2W5F FirstGlance]. <br>
6: ...odels|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resoluti...
7: ...eta-beta-xylotriose'>PRD_900117</scene>, <scene name='pdbligand=XYP:BETA-D-XYLOPYRANOSE'>XYP</scene><...
8: ...5f RCSB], [https://www.ebi.ac.uk/pdbsum/2w5f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbc... - Structure of E. coli DnaC helicase loader (26,352 bytes)
2: ...e structure was solved, and before it was easy to make a reliable prediction with [[AlphaFold]].
4: {{Theoretical_model}}
5: ...t' scene='User:Eric_Martz/Sandbox_4/Dnac_model_from_2ggz_a/8' caption=''>
10: ...he DNA so that each can be copied by the DnaG polymerase.
12: ===3D Structure: Homology Model=== - Group:SMART:Teams (4,502 bytes)
1: =Overview of the Program=
2: [[Image:SMART Teams photo 1.jpg|left]]
3: [[Image:Smart Teams photo 5.jpg|right|200px]]
5: ...tein using Rapid Prototyping technology, SMART teams create an oral presentation explaining their wor...
7: ...and Molecular Machines), students, and a research mentor. - Group:SMART:Tangible Models of Cdc42 Interacting With Intersectin (8,947 bytes)
1: ...'red'>A Lincoln HS SMART Team Telling a Molecular Story</font><font color = 'black'></font>'''==
2: [[Image:Lincoln Team 2008.JPG|left|360px]]
5: <font color = 'red'><b>Abraham Lincoln High School, San Francisco, California</b...
6: ...lizaveta Sergeeva, Jacqueline Tam, Allison Trinh, Michelle Xie, Ellen Zhang
10: <font color = 'blue'><b>Mentors:</b></font> - Sandbox13 (8,338 bytes)
1: <applet load='d6g' size='300' frame='true' align='right' caption='Insert caption her...
4: type <scene name='labelATOMS'>text</scene> text
10: <scene name='Sandbox13/D6g_yo/1'>TextToBeDisplayed</scene>
13: ...le rule of equal pressure. By capturing oxygen, hemoglobin produces a change in the internal pressure...
14: ...es%20Net%20Diffusion%20of%20Oxygen (interactive demo)]
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