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User:Michael Strong/H1N1/NS1/MSA

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H1N1 Swine Flu Multiple Sequence Alignment of NS1 Protein, 53 sequences

NS1 Homology Model, Mexico Strain, A/Mexico/InDRE4487/2009, residues 5-202, 84% sequence identity to pdp template 3f5t

Drag the structure with the mouse to rotate
Protein Polymorphism Strain with Polymorphism Number of Strains with Polymorphism
NS1 D12E 229536107_A/Nebraska/02/200 1
NS1 F32L 229535811_A/Texas/09/2009 1
NS1 G45R 229598886_A/Texas/15/2009 1
NS1 R88C 229536033_A/Minnesota/02/20 1
NS1 E97G 229892754_A/Canada-NS/RV153 1
NS1 M104T 237624336_A/swine/Alberta/O 1
NS1 I123V 229892764_A/Canada-AB/RV153 15
NS1 F134I 237624336_A/swine/Alberta/O 1 

gi|229598886_A/Texas/15/2009        MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKRRGNTL 50
gi|229892754_A/Canada-NS/RV153      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229536033_A/Minnesota/02/20      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229536107_A/Nebraska/02/200      MDSNTMSSFQVECFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229535811_A/Texas/09/2009        MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPLLDRLRRDQKSLKGRGNTL 50
gi|229396500_A/Ohio/07/2009         MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229396477_A/New_York/19/200      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229396402_A/New_York/31/200      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229396413_A/New_York/23/200      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229396387_A/New_York/18/200      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229396449_A/New_York/15/200      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229396351_A/New_York/12/200      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229396373_A/New_York/11/200      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229396433_A/New_York/10/200      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229396363_A/New_York/06/200      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229484061_A/Canada-ON/RV152      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229535829_A/California/14/2      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229892761_A/Canada-ON/RV152      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229892770_A/Canada-ON/RV152      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229892764_A/Canada-AB/RV153      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|237511869_A/Mexico/4108/200      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|237511872_A/Mexico/4115/200      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|237511860_A/Mexico/4486/200      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|237511866_A/Mexico/4603/200      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|237511857_A/Mexico/4604/200      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229892767_A/Canada-NS/RV153      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229892758_A/Mexico/InDRE411      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229783375_A/Korea/01/2009        MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229783386_A/New_York/1669/2      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229783407_A/New_York/1682/2      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229536016_A/Arizona/01/2009      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229536115_A/Michigan/02/200      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229535991_A/South_Carolina/      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229462691_A/Castilla-La          MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229462727_A/Castilla-La          MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229462715_A/Pais_Vasco/GP20      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229462703_A/Valencia/GP4/20      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229484054_A/Canada-NS/RV153      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229484058_A/Mexico/InDRE448      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229368684_A/Denmark/513/200      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229396460_A/Texas/06/2009        MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229536007_A/Kansas/03/2009       MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|227977123_A/California/08/2      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|227977155_A/California/08/2      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|227809839_A/California/04/2      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|227977111_A/California/04/2      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|228017753_A/California/06/2      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|227977143_A/California/07/2      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|227977167_A/California/07/2      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229299532_A/Texas/04/2009        MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|227831789_A/Texas/05/2009        MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|229299512_A/Texas/05/2009        MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
gi|237624336_A/swine/Alberta/O      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50
                                    ***********:*******************:************ *****

gi|229598886_A/Texas/15/2009        GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229892754_A/Canada-NS/RV153      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEGMSR 100
gi|229536033_A/Minnesota/02/20      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSCYLSDMTLEEMSR 100
gi|229536107_A/Nebraska/02/200      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229535811_A/Texas/09/2009        GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229396500_A/Ohio/07/2009         GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229396477_A/New_York/19/200      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229396402_A/New_York/31/200      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229396413_A/New_York/23/200      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229396387_A/New_York/18/200      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229396449_A/New_York/15/200      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229396351_A/New_York/12/200      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229396373_A/New_York/11/200      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229396433_A/New_York/10/200      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229396363_A/New_York/06/200      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229484061_A/Canada-ON/RV152      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229535829_A/California/14/2      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229892761_A/Canada-ON/RV152      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229892770_A/Canada-ON/RV152      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229892764_A/Canada-AB/RV153      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|237511869_A/Mexico/4108/200      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|237511872_A/Mexico/4115/200      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|237511860_A/Mexico/4486/200      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|237511866_A/Mexico/4603/200      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|237511857_A/Mexico/4604/200      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229892767_A/Canada-NS/RV153      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229892758_A/Mexico/InDRE411      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229783375_A/Korea/01/2009        GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229783386_A/New_York/1669/2      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229783407_A/New_York/1682/2      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229536016_A/Arizona/01/2009      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229536115_A/Michigan/02/200      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229535991_A/South_Carolina/      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229462691_A/Castilla-La          GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229462727_A/Castilla-La          GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229462715_A/Pais_Vasco/GP20      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229462703_A/Valencia/GP4/20      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229484054_A/Canada-NS/RV153      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229484058_A/Mexico/InDRE448      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229368684_A/Denmark/513/200      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229396460_A/Texas/06/2009        GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229536007_A/Kansas/03/2009       GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|227977123_A/California/08/2      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|227977155_A/California/08/2      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|227809839_A/California/04/2      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|227977111_A/California/04/2      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|228017753_A/California/06/2      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|227977143_A/California/07/2      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|227977167_A/California/07/2      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229299532_A/Texas/04/2009        GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|227831789_A/Texas/05/2009        GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|229299512_A/Texas/05/2009        GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
gi|237624336_A/swine/Alberta/O      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100
                                    ************************************* ******** ***

gi|229598886_A/Texas/15/2009        DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229892754_A/Canada-NS/RV153      DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229536033_A/Minnesota/02/20      DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229536107_A/Nebraska/02/200      DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229535811_A/Texas/09/2009        DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229396500_A/Ohio/07/2009         DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229396477_A/New_York/19/200      DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229396402_A/New_York/31/200      DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229396413_A/New_York/23/200      DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229396387_A/New_York/18/200      DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229396449_A/New_York/15/200      DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229396351_A/New_York/12/200      DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229396373_A/New_York/11/200      DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229396433_A/New_York/10/200      DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229396363_A/New_York/06/200      DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229484061_A/Canada-ON/RV152      DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229535829_A/California/14/2      DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229892761_A/Canada-ON/RV152      DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229892770_A/Canada-ON/RV152      DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229892764_A/Canada-AB/RV153      DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|237511869_A/Mexico/4108/200      DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|237511872_A/Mexico/4115/200      DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|237511860_A/Mexico/4486/200      DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|237511866_A/Mexico/4603/200      DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|237511857_A/Mexico/4604/200      DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229892767_A/Canada-NS/RV153      DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229892758_A/Mexico/InDRE411      DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229783375_A/Korea/01/2009        DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229783386_A/New_York/1669/2      DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229783407_A/New_York/1682/2      DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229536016_A/Arizona/01/2009      DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229536115_A/Michigan/02/200      DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229535991_A/South_Carolina/      DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229462691_A/Castilla-La          DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229462727_A/Castilla-La          DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229462715_A/Pais_Vasco/GP20      DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229462703_A/Valencia/GP4/20      DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229484054_A/Canada-NS/RV153      DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229484058_A/Mexico/InDRE448      DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229368684_A/Denmark/513/200      DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229396460_A/Texas/06/2009        DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229536007_A/Kansas/03/2009       DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|227977123_A/California/08/2      DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|227977155_A/California/08/2      DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|227809839_A/California/04/2      DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|227977111_A/California/04/2      DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|228017753_A/California/06/2      DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|227977143_A/California/07/2      DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|227977167_A/California/07/2      DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229299532_A/Texas/04/2009        DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|227831789_A/Texas/05/2009        DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|229299512_A/Texas/05/2009        DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150
gi|237624336_A/swine/Alberta/O      DWFTLMPRQKIIGPLCVRLDQAIMEKNIVLKANISVIFNRLETLILLRAF 150
                                    *** ******************:**********:****************

gi|229598886_A/Texas/15/2009        TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229892754_A/Canada-NS/RV153      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229536033_A/Minnesota/02/20      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229536107_A/Nebraska/02/200      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229535811_A/Texas/09/2009        TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229396500_A/Ohio/07/2009         TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229396477_A/New_York/19/200      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229396402_A/New_York/31/200      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229396413_A/New_York/23/200      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229396387_A/New_York/18/200      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229396449_A/New_York/15/200      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229396351_A/New_York/12/200      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229396373_A/New_York/11/200      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229396433_A/New_York/10/200      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229396363_A/New_York/06/200      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229484061_A/Canada-ON/RV152      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229535829_A/California/14/2      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229892761_A/Canada-ON/RV152      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229892770_A/Canada-ON/RV152      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229892764_A/Canada-AB/RV153      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|237511869_A/Mexico/4108/200      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|237511872_A/Mexico/4115/200      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|237511860_A/Mexico/4486/200      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|237511866_A/Mexico/4603/200      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|237511857_A/Mexico/4604/200      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229892767_A/Canada-NS/RV153      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229892758_A/Mexico/InDRE411      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229783375_A/Korea/01/2009        TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229783386_A/New_York/1669/2      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229783407_A/New_York/1682/2      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229536016_A/Arizona/01/2009      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229536115_A/Michigan/02/200      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229535991_A/South_Carolina/      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229462691_A/Castilla-La          TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229462727_A/Castilla-La          TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229462715_A/Pais_Vasco/GP20      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229462703_A/Valencia/GP4/20      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229484054_A/Canada-NS/RV153      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229484058_A/Mexico/InDRE448      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229368684_A/Denmark/513/200      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229396460_A/Texas/06/2009        TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229536007_A/Kansas/03/2009       TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|227977123_A/California/08/2      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|227977155_A/California/08/2      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|227809839_A/California/04/2      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|227977111_A/California/04/2      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|228017753_A/California/06/2      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|227977143_A/California/07/2      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|227977167_A/California/07/2      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229299532_A/Texas/04/2009        TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|227831789_A/Texas/05/2009        TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|229299512_A/Texas/05/2009        TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
gi|237624336_A/swine/Alberta/O      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200
                                    **************************************************

gi|229598886_A/Texas/15/2009        FAWRNCDENGRPSLPPEQK 219
gi|229892754_A/Canada-NS/RV153      FAWRNCDENGRPSLPPEQK 219
gi|229536033_A/Minnesota/02/20      FAWRNCDENGRPSLPPEQK 219
gi|229536107_A/Nebraska/02/200      FAWRNCDENGRPSLPPEQK 219
gi|229535811_A/Texas/09/2009        FAWRNCDENGRPSLPPEQK 219
gi|229396500_A/Ohio/07/2009         FAWRNCDENGRPSLPPEQK 219
gi|229396477_A/New_York/19/200      FAWRNCDENGRPSLPPEQK 219
gi|229396402_A/New_York/31/200      FAWRNCDENGRPSLPPEQK 219
gi|229396413_A/New_York/23/200      FAWRNCDENGRPSLPPEQK 219
gi|229396387_A/New_York/18/200      FAWRNCDENGRPSLPPEQK 219
gi|229396449_A/New_York/15/200      FAWRNCDENGRPSLPPEQK 219
gi|229396351_A/New_York/12/200      FAWRNCDENGRPSLPPEQK 219
gi|229396373_A/New_York/11/200      FAWRNCDENGRPSLPPEQK 219
gi|229396433_A/New_York/10/200      FAWRNCDENGRPSLPPEQK 219
gi|229396363_A/New_York/06/200      FAWRNCDENGRPSLPPEQK 219
gi|229484061_A/Canada-ON/RV152      FAWRNCDENGRPSLPPEQK 219
gi|229535829_A/California/14/2      FAWRNCDENGRPSLPPEQK 219
gi|229892761_A/Canada-ON/RV152      FAWRNCDENGRPSLPPEQK 219
gi|229892770_A/Canada-ON/RV152      FAWRNCDENGRPSLPPEQK 219
gi|229892764_A/Canada-AB/RV153      FAWRNCDENGRPSLPPEQK 219
gi|237511869_A/Mexico/4108/200      FAWRNCDENGRPSLPPEQK 219
gi|237511872_A/Mexico/4115/200      FAWRNCDENGRPSLPPEQK 219
gi|237511860_A/Mexico/4486/200      FAWRNCDENGRPSLPPEQK 219
gi|237511866_A/Mexico/4603/200      FAWRNCDENGRPSLPPEQK 219
gi|237511857_A/Mexico/4604/200      FAWRNCDENGRPSLPPEQK 219
gi|229892767_A/Canada-NS/RV153      FAWRNCDENGRPSLPPEQK 219
gi|229892758_A/Mexico/InDRE411      FAWRNCDENGRPSLPPEQK 219
gi|229783375_A/Korea/01/2009        FAWRNCDENGRPSLPPEQK 219
gi|229783386_A/New_York/1669/2      FAWRNCDENGRPSLPPEQK 219
gi|229783407_A/New_York/1682/2      FAWRNCDENGRPSLPPEQK 219
gi|229536016_A/Arizona/01/2009      FAWRNCDENGRPSLPPEQK 219
gi|229536115_A/Michigan/02/200      FAWRNCDENGRPSLPPEQK 219
gi|229535991_A/South_Carolina/      FAWRNCDENGRPSLPPEQK 219
gi|229462691_A/Castilla-La          FAWRNCDENGRPSLPPEQK 219
gi|229462727_A/Castilla-La          FAWRNCDENGRPSLPPEQK 219
gi|229462715_A/Pais_Vasco/GP20      FAWRNCDENGRPSLPPEQK 219
gi|229462703_A/Valencia/GP4/20      FAWRNCDENGRPSLPPEQK 219
gi|229484054_A/Canada-NS/RV153      FAWRNCDENGRPSLPPEQK 219
gi|229484058_A/Mexico/InDRE448      FAWRNCDENGRPSLPPEQK 219
gi|229368684_A/Denmark/513/200      FAWRNCDENGRPSLPPEQK 219
gi|229396460_A/Texas/06/2009        FAWRNCDENGRPSLPPEQK 219
gi|229536007_A/Kansas/03/2009       FAWRNCDENGRPSLPPEQK 219
gi|227977123_A/California/08/2      FAWRNCDENGRPSLPPEQK 219
gi|227977155_A/California/08/2      FAWRNCDENGRPSLPPEQK 219
gi|227809839_A/California/04/2      FAWRNCDENGRPSLPPEQK 219
gi|227977111_A/California/04/2      FAWRNCDENGRPSLPPEQK 219
gi|228017753_A/California/06/2      FAWRNCDENGRPSLPPEQK 219
gi|227977143_A/California/07/2      FAWRNCDENGRPSLPPEQK 219
gi|227977167_A/California/07/2      FAWRNCDENGRPSLPPEQK 219
gi|229299532_A/Texas/04/2009        FAWRNCDENGRPSLPPEQK 219
gi|227831789_A/Texas/05/2009        FAWRNCDENGRPSLPPEQK 219
gi|229299512_A/Texas/05/2009        FAWRNCDENGRPSLPPEQK 219
gi|237624336_A/swine/Alberta/O      FAWRNCDENGRPSLPPEQK 219
                                    *******************

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Michael Strong

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