User talk:Karsten Theis/scene transitions
From Proteopedia
List of figures: User:Karsten_Theis/scene_transitions
UvrB overall front view
script: https://proteopedia.org/wiki/scripts/77/779435/Front/1.spt
coords: https://proteopedia.org/cgi-bin/getfrozenstructure?3376534f803f2cbf7efafc136bc69829
UVrB overall back view
script: https://proteopedia.org/wiki/scripts/77/779435/Back/1.spt
coords: same as UvrB overall front view
ATP detail in context of entire UvrB protein
script: https://proteopedia.org/wiki/scripts/77/779435/Atp/1.spt
coords: same as UvrB overall front view
just DNA binding site
script: https://proteopedia.org/wiki/scripts/77/779435/Dna/5.spt
coords: same as UvrB overall front view
DNA binding site in context of entire UvrB protein
script: https://proteopedia.org/wiki/scripts/77/779435/Dna/1.spt
coords: same as UvrB overall front view
Lysozyme scene (different coordinates)
script: https://proteopedia.org/wiki/scripts/79/797412/Overall/3.spt
coords: https://proteopedia.org/cgi-bin/getfrozenstructure?5a9c4383f7d017a979f927dc88cb92dc
Structure of the enzyme lysozyme (sky blue) in complex with carbohydrate (gray, red and blue)
UvrB overall front view
script: https://proteopedia.org/wiki/scripts/77/779435/Front/1.spt
coords: same as UvrB overall front view
UVrB overall back view
script: https://proteopedia.org/wiki/scripts/77/779435/Back/6.spt
coords: same as UvrB overall front view
ATP detail in context of entire UvrB protein
script: https://proteopedia.org/wiki/scripts/77/779435/Atp/1.spt
coords: same as UvrB overall front view
Just ATP
script: https://proteopedia.org/wiki/scripts/77/779435/New/1.spt
coords: same as UvrB overall front view
spin off, default transition
DNA binding site in context of entire UvrB protein
script: https://proteopedia.org/wiki/scripts/77/779435/Dna/1.spt
coords: same as UvrB overall front view
Lysozyme scene (different coordinates)
script: https://proteopedia.org/wiki/scripts/79/797412/Overall/3.spt
coords: same as Lysozyme scene (different coordinates)
Structure of the enzyme lysozyme (sky blue) in complex with carbohydrate (gray, red and blue)
Jmol commands: buttons etc
B0: abrupt scene switch
set refreshing false; load =1d9z; moveto { 952 -288 -106 168.34} 707.57 0.0 0.0 {42.099225806451614 43.53887096774192 61.17029032258063} 68.42333343999844 {0 0 0} 0 0 0 3.0 0.0 0.0; restrict none; select ATP; wireframe 0.2; color CPK; set refreshing true;\n
B1: zoom out
zoomto 1.0 100;\n
B2: new zoomed out
moveto 1.0 { 952 -288 -106 168.34} 100.0 0.0 0.0 {42.099225806451614 43.53887096774192 61.17029032258063} 68.42333343999844 {0 0 0} 0 0 0 3.0 0.0 0.0;\n
B3: new view
moveto 1.0 { 952 -288 -106 168.34} 707.57 0.0 0.0 {42.099225806451614 43.53887096774192 61.17029032258063} 68.42333343999844 {0 0 0} 0 0 0 3.0 0.0 0.0;\n
BN: new scene
restrict none; select ATP; wireframe 0.2; color CPK; set refreshing true;\n
B0: abrupt scene switch
set refreshing false; load =1d9z; moveto 1.0 { -868 29 496 130.93} 90.0 0.0 0.0 {56.569378268323966 31.076560437205238 59.530780111444614} 51.673541253257795 {0 0 0} 0 0 0 3.0 0.0 0.0; restrict none; select ATP; spacefill on; color CPK; select protein; cartoon on; set refreshing true; set refreshing true;\n
B1: zoom out
zoomto 1.0 100;\n
B2: new zoomed out
moveto 1.0 { -868 29 496 130.93} 100.0 0.0 0.0 {56.569378268323966 31.076560437205238 59.530780111444614} 51.673541253257795 {0 0 0} 0 0 0 3.0 0.0 0.0;\n
B3: new view
moveto 1.0 { -868 29 496 130.93} 90.0 0.0 0.0 {56.569378268323966 31.076560437205238 59.530780111444614} 51.673541253257795 {0 0 0} 0 0 0 3.0 0.0 0.0;\n
BN: new scene
restrict none; select ATP; spacefill on; color CPK; select protein; cartoon on; set refreshing true;\n
Summary
Total of green links: 12
Total of Jmol buttons etc: 10
