User:Eran Hodis

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==Publications==
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Revision as of 18:30, 27 May 2012


Eran Hodis on the campus of the Weizmann Institute of Science in April of 2008
Eran Hodis on the campus of the Weizmann Institute of Science in April of 2008

I am an associate computational biologist at the Broad Institute and the Dana-Farber Cancer Institute in Levi Garraway's lab. Previously I was a computational biology graduate student at the Weizmann Insitute of Science in Eran Segal's lab. I'm one of the co-creators of Proteopedia and the developer of the eMovie PyMOL plug-in for macromolecular movie-making.

Contact me at

Publications

  • Berger MF, Hodis E, Heffernan TP, Deribe YL, Lawrence MS, Protopopov A, Ivanova E, Watson IR, Nickerson E, Ghosh P, Zhang H, Zeid R, Ren X, Cibulskis K, Sivachenko AY, Wagle N, Sucker A, Sougnez C, Onofrio R, Ambrogio L, Auclair D, Fennell T, Carter SL, Drier Y, Stojanov P, Singer MA, Voet D, Jing R, Saksena G, Barretina J, Ramos AH, Pugh TJ, Stransky N, Parkin M, Winckler W, Mahan S, Ardlie K, Baldwin J, Wargo J, Schadendorf D, Meyerson M, Gabriel SB, Golub TR, Wagner SN, Lander ES, Getz G, Chin L, Garraway LA. Melanoma genome sequencing reveals frequent PREX2 mutations. Nature. 2012 May 9;485(7399):502-6. doi: 10.1038/nature11071. PMID:22622578 doi:10.1038/nature11071
  • Hodis E, Prilusky J, Sussman JL. Proteopedia: A collaborative, virtual 3D web-resource for protein and biomolecule structure and function. Biochem Mol Biol Educ. 2010 Sep;38(5):341-2. doi: 10.1002/bmb.20431. PMID:21567857 doi:10.1002/bmb.20431
  • Prilusky J, Hodis E, Canner D, Decatur W, Oberholser K, Martz E, Berchanski A, Harel M, Sussman JL. Proteopedia: A status report on the collaborative, 3D web-encyclopedia of proteins and other biomolecules. J Struct Biol. 2011 Apr 23. PMID:21536137 doi:10.1016/j.jsb.2011.04.011
  • Itzkovitz S, Hodis E, Segal E. Overlapping codes within protein-coding sequences. Genome Res. 2010 Sep 14. PMID:20841429 doi:10.1101/gr.105072.110
  • Hodis E, Sussman JL. An encyclopedic effort to make 3D structures easier to understand. Trends Biochem Sci. 2009 Mar;34(3):100-1. Epub 2009 Feb 18. PMID:19230677 doi:10.1016/j.tibs.2009.01.001
  • Sarkar S, Isenberg BC, Hodis E, Leach JB, Desai TA, Wong JY. Fabrication of a layered microstructured polycaprolactone construct for 3-D tissue engineering. J Biomater Sci Polym Ed. 2008;19(10):1347-62. PMID:18854127 doi:10.1163/156856208786052371
  • Hodis E, Prilusky J, Martz E, Silman I, Moult J, Sussman JL. Proteopedia - a scientific 'wiki' bridging the rift between three-dimensional structure and function of biomacromolecules. Genome Biol. 2008;9(8):R121. Epub 2008 Aug 3. PMID:18673581 doi:http://dx.doi.org/10.1186/gb-2008-9-8-r121
  • Hodis E, Schreiber G, Rother K, Sussman JL. eMovie: a storyboard-based tool for making molecular movies. Trends Biochem Sci. 2007 May;32(5):199-204. Epub 2007 Apr 19. PMID:17448663 doi:10.1016/j.tibs.2007.03.008

My Working Area

Proteopedia Page Contributors and Editors (what is this?)

Eran Hodis

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