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Sandbox Reserved 806

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==3D Structure==
==3D Structure==
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The <scene name='56/563218/Beta_sheet/1'>secondary structure</scene> contains alpha helices (gold) and <scene name='56/563218/Beta_sheet/1'>beta sheets</scene>(purple). Overall, it forms a beta barrel motif.
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The <scene name='56/563218/Beta_sheet/1'>secondary structure</scene> contains alpha helices (gold) and beta sheets (purple). Overall, it forms a beta barrel motif.
<scene name='56/563218/Hydrogen_bonds/2'>Hydrogen Bonding</scene>
<scene name='56/563218/Hydrogen_bonds/2'>Hydrogen Bonding</scene>
==Residues==
==Residues==
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Pictured in yellow are the <scene name='56/563218/Hydrophobic_residues/1'>hydrophobic residues</scene>.
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Pictured in yellow are the <scene name='56/563218/Hydrophobic_residues_rotated/1'>hydrophobic residues</scene>. Note that they are primarily in place of the beta sheets.
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The <scene name='56/563218/Polarcharged_residues/1'>polar, charged</scene> rersidues are pictured in green. Note that they are on the outer part where the helices were.
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Overall, it gives TIM a more hydrophobic core and an more hydrophilic shell.

Revision as of 19:49, 13 October 2013

This Sandbox is Reserved from Oct 10, 2013, through May 20, 2014 for use in the course "CHEM 410 Biochemistry 1 and 2" taught by Hanna Tims at the Messiah College. This reservation includes Sandbox Reserved 780 through Sandbox Reserved 807.
To get started:
  • Click the edit this page tab at the top. Save the page after each step, then edit it again.
  • Click the 3D button (when editing, above the wikitext box) to insert Jmol.
  • show the Scene authoring tools, create a molecular scene, and save it. Copy the green link into the page.
  • Add a description of your scene. Use the buttons above the wikitext box for bold, italics, links, headlines, etc.

More help: Help:Editing

Triosephosphate Isomerase

Drag the structure with the mouse to rotate

Introduction

This is Triosephosphate isomerase, an enzyme in the glycolytic pathway. It is a dimer, but can function as a .

3D Structure

The contains alpha helices (gold) and beta sheets (purple). Overall, it forms a beta barrel motif.

Residues

Pictured in yellow are the . Note that they are primarily in place of the beta sheets. The rersidues are pictured in green. Note that they are on the outer part where the helices were. Overall, it gives TIM a more hydrophobic core and an more hydrophilic shell.

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