This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


Sandbox Reserved 1171

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 16: Line 16:
=== Binding Sites ===
=== Binding Sites ===
<scene name='72/721542/Tak_binding_site/3'>Tak-875 Binding Site</scene>
<scene name='72/721542/Tak_binding_site/3'>Tak-875 Binding Site</scene>
-
[[Image:4phubindingsite2.png|100 px|right|thumb|Figure 2. Second proposed binding site of GPR40. By visual inspection, a second possible binding site was proposed between transmembrane helices 3, 4, and 5 on the intracellular side.]]
+
[[Image:4phubindingsite2.png|200 px|right|thumb|Figure 2. Second proposed binding site of GPR40. By visual inspection, a second possible binding site was proposed between transmembrane helices 3, 4, and 5 on the intracellular side.]]
-
[[Image:4phubindingsite3.png|100 px|right|thumb|Figure 3. Third proposed binding site of GPR40. By visual inspection, a third possible binding site was proposed between transmembrane helices 1, 2, and 7 on the extracellular side.]]
+
[[Image:4phubindingsite3.png|200 px|right|thumb|Figure 3. Third proposed binding site of GPR40. By visual inspection, a third possible binding site was proposed between transmembrane helices 1, 2, and 7 on the extracellular side.]]
=== Ionic Charge Network ===
=== Ionic Charge Network ===

Revision as of 13:08, 22 March 2016

Human GPR40, also known as Free Fatty Acid Receptor 1 (FFAR1)

hGPR40

Drag the structure with the mouse to rotate

References

  1. Hanson, R. M., Prilusky, J., Renjian, Z., Nakane, T. and Sussman, J. L. (2013), JSmol and the Next-Generation Web-Based Representation of 3D Molecular Structure as Applied to Proteopedia. Isr. J. Chem., 53:207-216. doi:http://dx.doi.org/10.1002/ijch.201300024
  2. Herraez A. Biomolecules in the computer: Jmol to the rescue. Biochem Mol Biol Educ. 2006 Jul;34(4):255-61. doi: 10.1002/bmb.2006.494034042644. PMID:21638687 doi:10.1002/bmb.2006.494034042644
Personal tools