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4tf4
From Proteopedia
(Difference between revisions)
(New page: 200px<br /> <applet load="4tf4" size="450" color="white" frame="true" align="right" spinBox="true" caption="4tf4, resolution 2.0Å" /> '''ENDO/EXOCELLULASE:CE...) |
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| - | [[Image:4tf4.gif|left|200px]]<br /> | ||
| - | <applet load="4tf4" size="450" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="4tf4, resolution 2.0Å" /> | ||
| - | '''ENDO/EXOCELLULASE:CELLOPENTAOSE FROM THERMOMONOSPORA'''<br /> | ||
| - | == | + | ==ENDO/EXOCELLULASE:CELLOPENTAOSE FROM THERMOMONOSPORA== |
| - | Cellulase E4 from Thermomonospora fusca is unusual in that it has | + | <StructureSection load='4tf4' size='340' side='right' caption='[[4tf4]], [[Resolution|resolution]] 2.00Å' scene=''> |
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[4tf4]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"thermonospora_fusca"_henssen_1957 "thermonospora fusca" henssen 1957]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4TF4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4TF4 FirstGlance]. <br> | ||
| + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene></td></tr> | ||
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BAMH1-PST1 FRAGMENT OF T. FUSC ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2021 "Thermonospora fusca" Henssen 1957])</td></tr> | ||
| + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cellulase Cellulase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.4 3.2.1.4] </span></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4tf4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4tf4 OCA], [http://pdbe.org/4tf4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4tf4 RCSB], [http://www.ebi.ac.uk/pdbsum/4tf4 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4tf4 ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/tf/4tf4_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=4tf4 ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Cellulase E4 from Thermomonospora fusca is unusual in that it has characteristics of both exo- and endo-cellulases. Here we report the crystal structure of a 68K M(r) fragment of E4 (E4-68) at 1.9 A resolution. E4-68 contains both a family 9 catalytic domain, exhibiting an (alpha/alpha)6 barrel fold, and a family III cellulose binding domain, having an antiparallel beta-sandwich fold. While neither of these folds is novel, E4-68 provides the first cellulase structure having interacting catalytic and cellulose binding domains. The complexes of E4-68 with cellopentaose, cellotriose and cellobiose reveal conformational changes associated with ligand binding and allow us to propose a catalytic mechanism for family 9 enzymes. We also provide evidence that E4 has two novel characteristics: first it combines exo- and endo-activities and second, when it functions as an exo-cellulase, it cleaves off cellotetraose units. | ||
| - | + | Structure and mechanism of endo/exocellulase E4 from Thermomonospora fusca.,Sakon J, Irwin D, Wilson DB, Karplus PA Nat Struct Biol. 1997 Oct;4(10):810-8. PMID:9334746<ref>PMID:9334746</ref> | |
| - | + | ||
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | + | </div> | |
| - | + | <div class="pdbe-citations 4tf4" style="background-color:#fffaf0;"></div> | |
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| - | + | ==See Also== | |
| + | *[[Glucanase|Glucanase]] | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Thermonospora fusca henssen 1957]] | ||
| + | [[Category: Cellulase]] | ||
| + | [[Category: Karplus, P A]] | ||
| + | [[Category: Sakon, J]] | ||
| + | [[Category: Wilson, D B]] | ||
| + | [[Category: Alpha/alpha barrel]] | ||
| + | [[Category: Cellopentaose]] | ||
| + | [[Category: Enzyme:product complex]] | ||
| + | [[Category: Glycosyl hydrolase]] | ||
Current revision
ENDO/EXOCELLULASE:CELLOPENTAOSE FROM THERMOMONOSPORA
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