ATPase

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Line 105: Line 105:
**[[5ik2]], [[5hkk]] – F1-ATPS – ''Cakdalkalibacillus thermarum''<br />
**[[5ik2]], [[5hkk]] – F1-ATPS – ''Cakdalkalibacillus thermarum''<br />
-
''F1F0 ATPase α, β, γ, δ, ε subunits''
+
*''F1F0 ATPase α, β, γ, δ, ε subunits''
**[[4asu]], [[2jdi]], [[2jj1]], [[2jj2]] - bF1-ATPS<br />
**[[4asu]], [[2jdi]], [[2jj1]], [[2jj2]] - bF1-ATPS<br />
Line 118: Line 118:
**[[3j0j]] – TtATPS α,β,γ,δ,ε,ζ - Cryo EM<br />
**[[3j0j]] – TtATPS α,β,γ,δ,ε,ζ - Cryo EM<br />
-
''F1F0 ATPase α, β, γ, ε subunits''
+
*''F1F0 ATPase α, β, γ, ε subunits''
**[[3oaa]] – EcF1-ATPS (mutant)<br />
**[[3oaa]] – EcF1-ATPS (mutant)<br />
**[[1e79]] - bF1-ATPS<br />
**[[1e79]] - bF1-ATPS<br />
-
''F1F0 ATPase α,β,γ,δ,ε,9,B,D,6,O subunits''
+
*''F1F0 ATPase α,β,γ,δ,ε,9,B,D,6,O subunits''
**[[4b2q]] – yATPase – Cryo EM
**[[4b2q]] – yATPase – Cryo EM
Line 158: Line 158:
===V-ATPase===
===V-ATPase===
-
''V-ATPase subunit A''
+
*''V-ATPase subunit A''
**[[3i4l]] - PhATPS subunit A+AMPPNP<br />
**[[3i4l]] - PhATPS subunit A+AMPPNP<br />
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**[[5bn3]] – NeATPase + NEQ263 + ADP <br />
**[[5bn3]] – NeATPase + NEQ263 + ADP <br />
-
''V-ATPase subunit B''
+
*''V-ATPase subunit B''
**[[2c61]] - MmATPS subunit B – ''Methanosarcina mazei''<br />
**[[2c61]] - MmATPS subunit B – ''Methanosarcina mazei''<br />
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**[[3eiu]] - MmATPS subunit B+ATP<br />
**[[3eiu]] - MmATPS subunit B+ATP<br />
-
''V-ATPase subunit C''
+
*''V-ATPase subunit C''
**[[1u7l]], [[3u2f]], [[3u2y]], [[3u32]], [[3ud0]] - yATPS subunit C<br />
**[[1u7l]], [[3u2f]], [[3u2y]], [[3u32]], [[3ud0]] - yATPS subunit C<br />
Line 188: Line 188:
**[[3zk1]], [[3zk2]] - ATPS subunit C – ''Fusobacterium nucleatum<''br />
**[[3zk1]], [[3zk2]] - ATPS subunit C – ''Fusobacterium nucleatum<''br />
-
''V-ATPase subunit D+F''
+
*''V-ATPase subunit D+F''
**[[4rnd]] – yATPase subunit D+F<br />
**[[4rnd]] – yATPase subunit D+F<br />
-
''V-ATPase subunit E''
+
*''V-ATPase subunit E''
**[[2kz9]] – yATPase subunit E<br />
**[[2kz9]] – yATPase subunit E<br />
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**[[3v6i]] – TtATPS subunit E + VAPC<br />
**[[3v6i]] – TtATPS subunit E + VAPC<br />
-
''V-ATPase subunit F''
+
*''V-ATPase subunit F''
**[[2qai]] - ATPS subunit F – ''Pyrococcus furiosus''<br />
**[[2qai]] - ATPS subunit F – ''Pyrococcus furiosus''<br />
Line 207: Line 207:
**[[4ix9]] – yATP subunit F (mutant)<br />
**[[4ix9]] – yATP subunit F (mutant)<br />
-
''V-ATPase subunit G''
+
*''V-ATPase subunit G''
**[[2k88]] - yATPS subunit G residues 2-58 - NMR<br />
**[[2k88]] - yATPS subunit G residues 2-58 - NMR<br />
**[[2kwy]] - yATPS subunit G residues 61-101 - NMR<br />
**[[2kwy]] - yATPS subunit G residues 61-101 - NMR<br />
-
''V-ATPase subunit H''
+
*''V-ATPase subunit H''
**[[1ho8]] – yATPS subunit H <br />
**[[1ho8]] – yATPS subunit H <br />
-
''V-ATPase subunit K''
+
*''V-ATPase subunit K''
**[[2bl2]], [[2cyd]] - EhATPS subunit K – ''Enterococcus hirae''<br />
**[[2bl2]], [[2cyd]] - EhATPS subunit K – ''Enterococcus hirae''<br />
-
''V-ATPase subunit I''
+
*''V-ATPase subunit I''
**[[3rrk]] – ATPS subunit I N terminal – ''Meiothermus ruber''
**[[3rrk]] – ATPS subunit I N terminal – ''Meiothermus ruber''
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===P-ATPase===
===P-ATPase===
-
''Cu+2 transporting ATPase''
+
*''Cu+2 transporting ATPase''
**[[2kmv]], [[2kmx]], [[2arf]], [[2koy]] – hATPase NBD – human – NMR<br />
**[[2kmv]], [[2kmx]], [[2arf]], [[2koy]] – hATPase NBD – human – NMR<br />
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**[[3a1e]] - AfATPase (mutant) + AMPPCP<br />
**[[3a1e]] - AfATPase (mutant) + AMPPCP<br />
-
''Na/K transporting ATPase''
+
*''Na/K transporting ATPase''
**[[3a3y]] - SaATPase+K+ouabain – ''Squalus acanthias''<br />
**[[3a3y]] - SaATPase+K+ouabain – ''Squalus acanthias''<br />
Line 295: Line 295:
**[[2zxe]] - ATPase subunits α,β + phospholemman-like protein – spiny dogfish
**[[2zxe]] - ATPase subunits α,β + phospholemman-like protein – spiny dogfish
-
''Ca+2 transporting ATPase''
+
*''Ca+2 transporting ATPase''
**[[3fgo]] - rATPase+CPA+AMPPCP – rabbit<br />
**[[3fgo]] - rATPase+CPA+AMPPCP – rabbit<br />
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**[[4y3u]] - rATPase + phospholamban<br />
**[[4y3u]] - rATPase + phospholamban<br />
-
''Zn+2 transporting ATPase''
+
*''Zn+2 transporting ATPase''
**[[2ofg]], [[2ofh]] - sATPase N-terminal – NMR
**[[2ofg]], [[2ofh]] - sATPase N-terminal – NMR
**[[4umw]], [[4umv]] - ATPase +Mg – Shigella sonni<br />
**[[4umw]], [[4umv]] - ATPase +Mg – Shigella sonni<br />
-
''K+ transporting ATPase''
+
*''K+ transporting ATPase''
**[[2a00]], [[2a29]] - EcATPase NBD of KdpB+AMPPNP– ''Escherichia coli'' – NMR<br />
**[[2a00]], [[2a29]] - EcATPase NBD of KdpB+AMPPNP– ''Escherichia coli'' – NMR<br />
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**[[2ynr]], [[4ux2]], [[4ux1]], [[5y0b]] – pATPase – Cryo EM
**[[2ynr]], [[4ux2]], [[4ux1]], [[5y0b]] – pATPase – Cryo EM
-
''As+ transporting ATPase''
+
*''As+ transporting ATPase''
**[[1ii0]], [[1f48]] - EcATPase<br />
**[[1ii0]], [[1f48]] - EcATPase<br />
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[[3ibg]] - ATPase GET3 – ''Aspergillus fumigatus''
[[3ibg]] - ATPase GET3 – ''Aspergillus fumigatus''
-
''H+ transporting ATPase''
+
*''H+ transporting ATPase''
**[[5ksd]] - AtATPase C terminal truncated<br />
**[[5ksd]] - AtATPase C terminal truncated<br />
**[[1mhs]] - ATPase – ''Neurospora crassa''<br />
**[[1mhs]] - ATPase – ''Neurospora crassa''<br />
-
''Na+ transporting ATPase''
+
*''Na+ transporting ATPase''
**[[2db4]], [[3aou]] - EhATPase subunit K – ''Enterococcus hirae''<br />
**[[2db4]], [[3aou]] - EhATPase subunit K – ''Enterococcus hirae''<br />
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**[[1yce]] - ATPase rotor ring – ''Ilyobacter tartaricus''
**[[1yce]] - ATPase rotor ring – ''Ilyobacter tartaricus''
-
''H/K transporting ATPase''
+
*''H/K transporting ATPase''
**[[1iwc]], [[1iwf]] - pATPase NBD <br />
**[[1iwc]], [[1iwf]] - pATPase NBD <br />
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**[[2xzb]] – pATPase subunits α, β<br />
**[[2xzb]] – pATPase subunits α, β<br />
-
''Mg+2 transporting ATPase''
+
*''Mg+2 transporting ATPase''
**[[3gwi]] – EcATPase P-1 NBD
**[[3gwi]] – EcATPase P-1 NBD
-
''Arg/ornithine transporting ATPase''
+
*''Arg/ornithine transporting ATPase''
**[[3md0]] – MtATPase+GDP – ''Mycobacterium tuberculosis''<br />
**[[3md0]] – MtATPase+GDP – ''Mycobacterium tuberculosis''<br />
Line 480: Line 480:
**[[3qku]] - PfRad50 NBD + AMPPNP + MRE11
**[[3qku]] - PfRad50 NBD + AMPPNP + MRE11
-
===MipZ ATPase===
+
*MipZ ATPase
[[2xit]], [[2xj4]] – CcMipZ – ''Caulobacter crescentus''<br />
[[2xit]], [[2xj4]] – CcMipZ – ''Caulobacter crescentus''<br />
Line 491: Line 491:
**[[3nbx]] – EcATPase Rava + ADP
**[[3nbx]] – EcATPase Rava + ADP
-
'''FlaI ATPase'''
+
*'''FlaI ATPase'''
**[[4ihq]], [[4ii7]] – ATPase (mutant) – ''Sulfolobus acidocaldarius''<br />
**[[4ihq]], [[4ii7]] – ATPase (mutant) – ''Sulfolobus acidocaldarius''<br />

Revision as of 09:57, 25 March 2018

An ATPase, Human RuvB-like 1 dodecamer complex with ADP (PDB code 2c9o)

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Contents

3D Structures of ATPase

Updated on 25-March-2018

V-ATPase

(mutant)

P-ATPase

3ibg - ATPase GET3 – Aspergillus fumigatus

2xit, 2xj4 – CcMipZ – Caulobacter crescentus
2xj9 – CcMipZ (mutant)



References

  1. ↑ Gorynia S, Bandeiras TM, Pinho FG, McVey CE, Vonrhein C, Round A, Svergun DI, Donner P, Matias PM, Carrondo MA. Structural and functional insights into a dodecameric molecular machine - The RuvBL1/RuvBL2 complex. J Struct Biol. 2011 Sep 10. PMID:21933716 doi:10.1016/j.jsb.2011.09.001
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