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User:Karsten Theis/Animation course
From Proteopedia
(Difference between revisions)
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<jmol><jmolLink><script>ago2 = {BF0}.xyz.all</script><text>store agonist 2</text></jmolLink></jmol> | <jmol><jmolLink><script>ago2 = {BF0}.xyz.all</script><text>store agonist 2</text></jmolLink></jmol> | ||
| + | |||
| + | <jmol><jmolLink><script>ago3 = {BF0}.xyz.all</script><text>store agonist 3</text></jmolLink></jmol> | ||
| Line 222: | Line 224: | ||
<jmol><jmolLink><script>anta2 = {2.1}.xyz.all</script><text>store antagonist 2</text></jmolLink></jmol> | <jmol><jmolLink><script>anta2 = {2.1}.xyz.all</script><text>store antagonist 2</text></jmolLink></jmol> | ||
| + | |||
| + | <jmol><jmolLink><script>anta3 = {2.1}.xyz.all</script><text>store antagonist 3</text></jmolLink></jmol> | ||
===Recall ligand position=== | ===Recall ligand position=== | ||
Clicking on the links below will restore the agonist and antagonist positions: | Clicking on the links below will restore the agonist and antagonist positions: | ||
| - | <jmol><jmolLink><script>ROTATE COMPARE {BF0} @{ago0} - | + | <jmol><jmolLink><script>ROTATE COMPARE {BF0} @{ago0} -1</script><text>agonist original</text></jmolLink></jmol> |
| - | <jmol><jmolLink><script>ROTATE COMPARE {BF0} @{ago1} - | + | <jmol><jmolLink><script>ROTATE COMPARE {BF0} @{ago1} -1</script><text>agonist 1</text></jmolLink></jmol> |
<jmol><jmolLink><script>ROTATE COMPARE {BF0} @{ago2} -2</script><text>agonist 2</text></jmolLink></jmol> | <jmol><jmolLink><script>ROTATE COMPARE {BF0} @{ago2} -2</script><text>agonist 2</text></jmolLink></jmol> | ||
| - | <jmol><jmolLink><script>ROTATE COMPARE {2.1} @{anta0} - | + | <jmol><jmolLink><script>ROTATE COMPARE {BF0} @{ago3} -2</script><text>agonist 3</text></jmolLink></jmol> |
| + | |||
| + | <jmol><jmolLink><script>ROTATE COMPARE {2.1} @{anta0} -1</script><text>antagonist original</text></jmolLink></jmol> | ||
<jmol><jmolLink><script>ROTATE COMPARE {2.1} @{anta1} -2</script><text>antagonist 1</text></jmolLink></jmol> | <jmol><jmolLink><script>ROTATE COMPARE {2.1} @{anta1} -2</script><text>antagonist 1</text></jmolLink></jmol> | ||
| Line 238: | Line 244: | ||
<jmol><jmolLink><script>ROTATE COMPARE {2.1} @{anta2} -2</script><text>antagonist 2</text></jmolLink></jmol> | <jmol><jmolLink><script>ROTATE COMPARE {2.1} @{anta2} -2</script><text>antagonist 2</text></jmolLink></jmol> | ||
| + | <jmol><jmolLink><script>ROTATE COMPARE {2.1} @{anta3} -2</script><text>antagonist 3</text></jmolLink></jmol> | ||
Show the saved states in a console: | Show the saved states in a console: | ||
| - | <jmol><jmolLink><script>console; show | + | <jmol><jmolLink><script>console; show ago0; show ago1; show ago2; show ago3; show anta0; show anta1; show anta2; show anta3; </script><text>show states</text></jmolLink></jmol> |
| + | |||
| + | <jmol><jmolLink><script>ROTATE COMPARE {2.1} @{anta2} -2; ROTATE COMPARE {2.1} @{anta1} -1; ROTATE COMPARE {2.1} @{anta2} -1; ROTATE COMPARE {2.1} @{anta3} -2; ROTATE COMPARE {bf0} @{ago1} -1; ROTATE COMPARE {bf0} @{ago2} -2; ROTATE COMPARE {bf0} @{ago3} -2; ROTATE COMPARE {2.1} @{anta2} -2; ROTATE COMPARE {2.1} @{anta1} -1; ROTATE COMPARE {2.1} @{anta0} -1;</script><text>show states</text></jmolLink></jmol> | ||
==Collection of molecules== | ==Collection of molecules== | ||
Revision as of 12:23, 15 October 2019
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